Analysis of interatomic Contacts of Structural Units in PDB entry:
5UOY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UOY entry

There is 1 chain in PDB entry 5UOY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 150ALA 501
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5UOY. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
151 159Right-handed alpha
Helix 2
AA2
A
167 175Right-handed alpha
Helix 3
AA3
A
178 191Right-handed alpha
Helix 4
AA4
A
192 197Right-handed alpha
Helix 5
AA5
A
200 216Right-handed alpha
Helix 6
AA6
A
224 243Right-handed alpha
Helix 7
AA7
A
244 248Right-handed 310
Helix 8
AA8
A
249 263Right-handed alpha
Helix 9
AA9
A
271 278Right-handed alpha
Helix 10
AB1
A
280 286Right-handed alpha
Helix 11
AB2
A
290 304Right-handed alpha
Helix 12
AB3
A
305 310Right-handed 310
Helix 13
AB4
A
316 333Right-handed alpha
Helix 14
AB5
A
334 337Right-handed 310
Helix 15
AB6
A
338 352Right-handed alpha
Helix 16
AB7
A
357 371Right-handed alpha
Helix 17
AB8
A
372 376Right-handed 310
Helix 18
AB9
A
377 402Right-handed alpha
Helix 19
AC1
A
416 428Right-handed alpha
Helix 20
AC2
A
428 444Right-handed alpha
Helix 21
AC3
A
477 500Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5UOY

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il