Analysis of interatomic Contacts of Structural Units in PDB entry:
5UV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5UV6 entry

There are 2 chains in PDB entry 5UV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 42VAL 319
B
MET 42VAL 319
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 5UV6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
106 110Right-handed 310
Helix 2
AA2
A
193 197Right-handed 310
Helix 3
AA3
B
106 110Right-handed 310
Helix 4
AA4
B
193 197Right-handed 310
Back to top of page

There are 12 sheets in PDB entry 5UV6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
44 48first strand
Strand 2
A
127 141parallel
Strand 3
A
111 119anti-parallel
Strand 4
A
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
80 81first strand
Strand 2
A
73 77anti-parallel
Strand 3
A
63 70anti-parallel
Strand 4
A
111 119anti-parallel
Strand 5
A
127 141anti-parallel
Strand 6
A
153 162anti-parallel
Strand 7
A
186 189anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
53 58first strand
Strand 2
A
97 102anti-parallel
Strand 3
A
88 94anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 148first strand
Strand 2
A
212 228parallel
Strand 3
A
198 205anti-parallel
Strand 4
A
166 171anti-parallel
Strand 5
A
180 182anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
145 148first strand
Strand 2
A
212 228parallel
Strand 3
A
240 249anti-parallel
Strand 4
A
278 283anti-parallel
Strand 5
A
270 274anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
232 233first strand
Strand 2
A
303 312parallel
Strand 3
A
292 300anti-parallel
Strand 4
A
253 258anti-parallel
Strand 5
A
261 262anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
44 48first strand
Strand 2
B
127 141parallel
Strand 3
B
111 119anti-parallel
Strand 4
B
123 124anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
80 81first strand
Strand 2
B
73 77anti-parallel
Strand 3
B
63 70anti-parallel
Strand 4
B
111 119anti-parallel
Strand 5
B
127 141anti-parallel
Strand 6
B
153 162anti-parallel
Strand 7
B
186 189anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
53 58first strand
Strand 2
B
97 102anti-parallel
Strand 3
B
88 94anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
145 148first strand
Strand 2
B
212 229parallel
Strand 3
B
198 205anti-parallel
Strand 4
B
166 171anti-parallel
Strand 5
B
180 182anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
145 148first strand
Strand 2
B
212 229parallel
Strand 3
B
242 249anti-parallel
Strand 4
B
278 283anti-parallel
Strand 5
B
270 274anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
232 233first strand
Strand 2
B
303 312parallel
Strand 3
B
292 300anti-parallel
Strand 4
B
253 257anti-parallel
Strand 5
B
262 263anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il