Analysis of interatomic Contacts of Structural Units in PDB entry:
5W5G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W5G entry

There are 3 chains in PDB entry 5W5G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 372GLU 633
B
 ARG 373GLY 627
C
 ARG 373THR 626
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 5W5G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
383 388Right-handed alpha
Helix 2
AA2
A
391 397Right-handed alpha
Helix 3
AA3
A
420 427Right-handed 310
Helix 4
AA4
A
431 448Right-handed alpha
Helix 5
AA5
A
460 474Right-handed alpha
Helix 6
AA6
A
486 489Right-handed 310
Helix 7
AA7
A
491 495Right-handed 310
Helix 8
AA8
A
505 512Right-handed alpha
Helix 9
AA9
A
525 529Right-handed 310
Helix 10
AB1
A
534 554Right-handed alpha
Helix 11
AB2
A
565 575Right-handed alpha
Helix 12
AB3
A
576 578Right-handed 310
Helix 13
AB4
A
583 592Right-handed alpha
Helix 14
AB5
B
383 388Right-handed alpha
Helix 15
AB6
B
392 396Right-handed 310
Helix 16
AB7
B
420 427Right-handed 310
Helix 17
AB8
B
431 448Right-handed alpha
Helix 18
AB9
B
460 475Right-handed alpha
Helix 19
AC1
B
486 489Right-handed 310
Helix 20
AC2
B
491 495Right-handed 310
Helix 21
AC3
B
505 511Right-handed alpha
Helix 22
AC4
B
525 529Right-handed 310
Helix 23
AC5
B
534 552Right-handed alpha
Helix 24
AC6
B
565 575Right-handed alpha
Helix 25
AC7
B
576 578Right-handed 310
Helix 26
AC8
B
583 592Right-handed alpha
Helix 27
AC9
C
383 388Right-handed alpha
Helix 28
AD1
C
391 397Right-handed alpha
Helix 29
AD2
C
420 427Right-handed 310
Helix 30
AD3
C
431 448Right-handed alpha
Helix 31
AD4
C
460 474Right-handed alpha
Helix 32
AD5
C
486 489Right-handed 310
Helix 33
AD6
C
505 511Right-handed alpha
Helix 34
AD7
C
525 529Right-handed 310
Helix 35
AD8
C
534 554Right-handed alpha
Helix 36
AD9
C
565 572Right-handed alpha
Helix 37
AE1
C
583 592Right-handed alpha
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There are 3 sheets in PDB entry 5W5G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 484first strand
Strand 2
A
454 457parallel
Strand 3
A
560 564parallel
Strand 4
A
374 379parallel
Strand 5
A
599 604anti-parallel
Strand 6
A
611 613anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
483 484first strand
Strand 2
B
454 457parallel
Strand 3
B
560 564parallel
Strand 4
B
374 379parallel
Strand 5
B
599 604anti-parallel
Strand 6
B
611 613anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
482 484first strand
Strand 2
C
454 457parallel
Strand 3
C
559 564parallel
Strand 4
C
374 379parallel
Strand 5
C
599 604anti-parallel
Strand 6
C
611 614anti-parallel
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