Analysis of interatomic Contacts of Structural Units in PDB entry:
5W5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5W5T entry

There are 4 chains in PDB entry 5W5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 7LEU 419
B
VAL 7LEU 421
C
VAL 7LEU 421
D
VAL 7ASP 49
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are351 helices in PDB entry 5W5T. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
9 12Right-handed 310
Helix 2
AA2
A
24 32Right-handed 310
Helix 3
AA3
A
35 38Right-handed 310
Helix 4
AA4
A
48 58Right-handed alpha
Helix 5
AA5
A
71 82Right-handed alpha
Helix 6
AA6
A
86 90Right-handed 310
Helix 7
AA7
A
112 117Right-handed alpha
Helix 8
AA8
A
118 126Right-handed alpha
Helix 9
AA9
A
142 154Right-handed alpha
Helix 10
AB1
A
167 171Right-handed 310
Helix 11
AB2
A
214 227Right-handed alpha
Helix 12
AB3
A
237 246Right-handed alpha
Helix 13
AB4
A
253 257Right-handed alpha
Helix 14
AB5
A
273 284Right-handed alpha
Helix 15
AB6
A
393 401Right-handed alpha
Helix 16
AB7
A
412 418Right-handed alpha
Helix 17
AB8
B
9 12Right-handed 310
Helix 18
AB9
B
24 32Right-handed 310
Helix 19
AC1
B
35 38Right-handed 310
Helix 20
AC2
B
48 58Right-handed alpha
Helix 21
AC3
B
71 82Right-handed alpha
Helix 22
AC4
B
86 90Right-handed 310
Helix 23
AC5
B
110 117Right-handed alpha
Helix 24
AC6
B
118 123Right-handed alpha
Helix 25
AC7
B
124 126Right-handed 310
Helix 26
AC8
B
142 154Right-handed alpha
Helix 27
AC9
B
168 171Right-handed 310
Helix 28
AD1
B
214 226Right-handed alpha
Helix 29
AD2
B
237 246Right-handed alpha
Helix 30
AD3
B
253 257Right-handed alpha
Helix 31
AD4
B
273 283Right-handed alpha
Helix 32
AD5
B
284 286Right-handed 310
Helix 33
AD6
B
393 401Right-handed alpha
Helix 34
AD7
B
412 418Right-handed alpha
Helix 35
AD8
C
9 12Right-handed 310
Helix 36
AD9
C
24 32Right-handed 310
Helix 37
AE1
C
35 38Right-handed 310
Helix 38
AE2
C
47 58Right-handed alpha
Helix 39
AE3
C
71 82Right-handed alpha
Helix 40
AE4
C
86 90Right-handed 310
Helix 41
AE5
C
110 117Right-handed alpha
Helix 42
AE6
C
118 123Right-handed alpha
Helix 43
AE7
C
124 126Right-handed 310
Helix 44
AE8
C
142 154Right-handed alpha
Helix 45
AE9
C
166 170Right-handed alpha
Helix 46
AF1
C
214 226Right-handed alpha
Helix 47
AF2
C
237 246Right-handed alpha
Helix 48
AF3
C
253 257Right-handed alpha
Helix 49
AF4
C
273 283Right-handed alpha
Helix 50
AF5
C
284 286Right-handed 310
Helix 51
AF6
C
393 401Right-handed alpha
Helix 52
AF7
C
412 418Right-handed alpha
Helix 53
AF8
D
9 12Right-handed 310
Helix 54
AF9
D
24 32Right-handed 310
Helix 55
AG1
D
35 38Right-handed 310
Helix 56
AG2
D
47 59Right-handed alpha
Helix 57
AG3
D
71 82Right-handed alpha
Helix 58
AG4
D
86 90Right-handed 310
Helix 59
AG5
D
110 117Right-handed alpha
Helix 60
AG6
D
118 123Right-handed alpha
Helix 61
AG7
D
142 154Right-handed alpha
Helix 62
AG8
D
166 170Right-handed alpha
Helix 63
AG9
D
214 227Right-handed alpha
Helix 64
AH1
D
237 246Right-handed alpha
Helix 65
AH2
D
254 256Right-handed 310
Helix 66
AH3
D
273 283Right-handed alpha
Helix 67
AH4
D
284 286Right-handed 310
Helix 68
AH5
D
393 401Right-handed alpha
Helix 69
AH6
D
412 418Right-handed alpha
Helix 70
AH7
E
9 12Right-handed 310
Helix 71
AH8
E
24 32Right-handed 310
Helix 72
AH9
E
35 38Right-handed 310
Helix 73
AI1
E
47 58Right-handed alpha
Helix 74
AI2
E
74 82Right-handed alpha
Helix 75
AI3
E
86 90Right-handed 310
Helix 76
AI4
E
110 117Right-handed alpha
Helix 77
AI5
E
118 123Right-handed alpha
Helix 78
AI6
E
124 126Right-handed 310
Helix 79
AI7
E
142 154Right-handed alpha
Helix 80
AI8
E
166 170Right-handed alpha
Helix 81
AI9
E
214 227Right-handed alpha
Helix 82
AJ1
E
237 246Right-handed alpha
Helix 83
AJ2
E
253 257Right-handed alpha
Helix 84
AJ3
E
273 283Right-handed alpha
Helix 85
AJ4
E
284 286Right-handed 310
Helix 86
AJ5
E
393 401Right-handed alpha
Helix 87
AJ6
E
412 418Right-handed alpha
Helix 88
AJ7
F
9 12Right-handed 310
Helix 89
AJ8
F
24 32Right-handed 310
Helix 90
AJ9
F
35 38Right-handed 310
Helix 91
AK1
F
47 58Right-handed alpha
Helix 92
AK2
F
71 82Right-handed alpha
Helix 93
AK3
F
86 90Right-handed 310
Helix 94
AK4
F
110 117Right-handed alpha
Helix 95
AK5
F
118 123Right-handed alpha
Helix 96
AK6
F
143 154Right-handed alpha
Helix 97
AK7
F
167 171Right-handed 310
Helix 98
AK8
F
214 227Right-handed alpha
Helix 99
AK9
F
237 246Right-handed alpha
Helix 100
AL1
F
253 257Right-handed alpha
Helix 101
AL2
F
273 283Right-handed alpha
Helix 102
AL3
F
284 286Right-handed 310
Helix 103
AL4
F
393 401Right-handed alpha
Helix 104
AL5
F
412 418Right-handed alpha
Helix 105
AL6
G
9 12Right-handed 310
Helix 106
AL7
G
24 32Right-handed 310
Helix 107
AL8
G
35 38Right-handed 310
Helix 108
AL9
G
48 58Right-handed alpha
Helix 109
AM1
G
71 82Right-handed alpha
Helix 110
AM2
G
86 90Right-handed 310
Helix 111
AM3
G
112 117Right-handed alpha
Helix 112
AM4
G
118 123Right-handed alpha
Helix 113
AM5
G
124 126Right-handed 310
Helix 114
AM6
G
142 154Right-handed alpha
Helix 115
AM7
G
167 171Right-handed 310
Helix 116
AM8
G
214 227Right-handed alpha
Helix 117
AM9
G
237 246Right-handed alpha
Helix 118
AN1
G
253 257Right-handed alpha
Helix 119
AN2
G
273 283Right-handed alpha
Helix 120
AN3
G
284 286Right-handed 310
Helix 121
AN4
G
393 401Right-handed alpha
Helix 122
AN5
G
412 418Right-handed alpha
Helix 123
AN6
H
9 12Right-handed 310
Helix 124
AN7
H
24 32Right-handed 310
Helix 125
AN8
H
35 38Right-handed 310
Helix 126
AN9
H
48 58Right-handed alpha
Helix 127
AO1
H
71 82Right-handed alpha
Helix 128
AO2
H
86 90Right-handed 310
Helix 129
AO3
H
112 117Right-handed alpha
Helix 130
AO4
H
118 123Right-handed alpha
Helix 131
AO5
H
142 154Right-handed alpha
Helix 132
AO6
H
167 171Right-handed 310
Helix 133
AO7
H
214 226Right-handed alpha
Helix 134
AO8
H
237 246Right-handed alpha
Helix 135
AO9
H
253 257Right-handed alpha
Helix 136
AP1
H
273 284Right-handed alpha
Helix 137
AP2
H
393 401Right-handed alpha
Helix 138
AP3
H
412 417Right-handed alpha
Helix 139
AP4
I
9 12Right-handed 310
Helix 140
AP5
I
24 32Right-handed 310
Helix 141
AP6
I
35 38Right-handed 310
Helix 142
AP7
I
47 59Right-handed alpha
Helix 143
AP8
I
71 82Right-handed alpha
Helix 144
AP9
I
86 90Right-handed 310
Helix 145
AQ1
I
112 117Right-handed alpha
Helix 146
AQ2
I
118 123Right-handed alpha
Helix 147
AQ3
I
142 154Right-handed alpha
Helix 148
AQ4
I
166 170Right-handed alpha
Helix 149
AQ5
I
214 227Right-handed alpha
Helix 150
AQ6
I
237 246Right-handed alpha
Helix 151
AQ7
I
253 257Right-handed alpha
Helix 152
AQ8
I
273 283Right-handed alpha
Helix 153
AQ9
I
284 286Right-handed 310
Helix 154
AR1
I
393 401Right-handed alpha
Helix 155
AR2
I
412 418Right-handed alpha
Helix 156
AR3
J
9 12Right-handed 310
Helix 157
AR4
J
24 32Right-handed 310
Helix 158
AR5
J
35 38Right-handed 310
Helix 159
AR6
J
48 58Right-handed alpha
Helix 160
AR7
J
71 82Right-handed alpha
Helix 161
AR8
J
86 90Right-handed 310
Helix 162
AR9
J
110 117Right-handed alpha
Helix 163
AS1
J
118 123Right-handed alpha
Helix 164
AS2
J
142 154Right-handed alpha
Helix 165
AS3
J
166 170Right-handed alpha
Helix 166
AS4
J
214 226Right-handed alpha
Helix 167
AS5
J
237 246Right-handed alpha
Helix 168
AS6
J
254 256Right-handed 310
Helix 169
AS7
J
273 283Right-handed alpha
Helix 170
AS8
J
284 286Right-handed 310
Helix 171
AS9
J
393 401Right-handed alpha
Helix 172
AT1
J
412 418Right-handed alpha
Helix 173
AT2
K
9 12Right-handed 310
Helix 174
AT3
K
24 32Right-handed 310
Helix 175
AT4
K
35 38Right-handed 310
Helix 176
AT5
K
48 58Right-handed alpha
Helix 177
AT6
K
71 82Right-handed alpha
Helix 178
AT7
K
86 90Right-handed 310
Helix 179
AT8
K
110 117Right-handed alpha
Helix 180
AT9
K
118 123Right-handed alpha
Helix 181
AU1
K
124 126Right-handed 310
Helix 182
AU2
K
142 154Right-handed alpha
Helix 183
AU3
K
167 170Right-handed 310
Helix 184
AU4
K
214 227Right-handed alpha
Helix 185
AU5
K
237 246Right-handed alpha
Helix 186
AU6
K
253 257Right-handed alpha
Helix 187
AU7
K
273 283Right-handed alpha
Helix 188
AU8
K
284 286Right-handed 310
Helix 189
AU9
K
395 401Right-handed alpha
Helix 190
AV1
K
412 418Right-handed alpha
Helix 191
AV2
L
9 12Right-handed 310
Helix 192
AV3
L
24 32Right-handed 310
Helix 193
AV4
L
35 38Right-handed 310
Helix 194
AV5
L
47 58Right-handed alpha
Helix 195
AV6
L
71 82Right-handed alpha
Helix 196
AV7
L
86 90Right-handed 310
Helix 197
AV8
L
110 117Right-handed alpha
Helix 198
AV9
L
118 123Right-handed alpha
Helix 199
AW1
L
124 126Right-handed 310
Helix 200
AW2
L
142 154Right-handed alpha
Helix 201
AW3
L
167 171Right-handed 310
Helix 202
AW4
L
214 227Right-handed alpha
Helix 203
AW5
L
237 246Right-handed alpha
Helix 204
AW6
L
253 257Right-handed alpha
Helix 205
AW7
L
273 283Right-handed alpha
Helix 206
AW8
L
284 286Right-handed 310
Helix 207
AW9
L
393 401Right-handed alpha
Helix 208
AX1
L
412 418Right-handed alpha
Helix 209
AX2
M
9 12Right-handed 310
Helix 210
AX3
M
24 32Right-handed 310
Helix 211
AX4
M
35 38Right-handed 310
Helix 212
AX5
M
48 58Right-handed alpha
Helix 213
AX6
M
71 82Right-handed alpha
Helix 214
AX7
M
86 90Right-handed 310
Helix 215
AX8
M
110 117Right-handed alpha
Helix 216
AX9
M
118 126Right-handed alpha
Helix 217
AY1
M
142 154Right-handed alpha
Helix 218
AY2
M
166 170Right-handed alpha
Helix 219
AY3
M
214 227Right-handed alpha
Helix 220
AY4
M
237 246Right-handed alpha
Helix 221
AY5
M
253 257Right-handed alpha
Helix 222
AY6
M
273 283Right-handed alpha
Helix 223
AY7
M
284 286Right-handed 310
Helix 224
AY8
M
393 401Right-handed alpha
Helix 225
AY9
M
412 418Right-handed alpha
Helix 226
AZ1
N
9 12Right-handed 310
Helix 227
AZ2
N
24 32Right-handed 310
Helix 228
AZ3
N
35 38Right-handed 310
Helix 229
AZ4
N
48 59Right-handed alpha
Helix 230
AZ5
N
71 82Right-handed alpha
Helix 231
AZ6
N
86 90Right-handed 310
Helix 232
AZ7
N
110 117Right-handed alpha
Helix 233
AZ8
N
118 126Right-handed alpha
Helix 234
AZ9
N
142 154Right-handed alpha
Helix 235
BA1
N
168 171Right-handed 310
Helix 236
BA2
N
214 226Right-handed alpha
Helix 237
BA3
N
237 246Right-handed alpha
Helix 238
BA4
N
253 257Right-handed alpha
Helix 239
BA5
N
273 283Right-handed alpha
Helix 240
BA6
N
284 286Right-handed 310
Helix 241
BA7
N
393 401Right-handed alpha
Helix 242
BA8
N
412 417Right-handed alpha
Helix 243
BA9
O
9 12Right-handed 310
Helix 244
BB1
O
24 32Right-handed 310
Helix 245
BB2
O
35 38Right-handed 310
Helix 246
BB3
O
48 59Right-handed alpha
Helix 247
BB4
O
73 74Right-handed 310
Helix 248
BB5
O
76 76Right-handed 310
Helix 249
BB6
O
77 82Right-handed alpha
Helix 250
BB7
O
86 90Right-handed 310
Helix 251
BB8
O
110 117Right-handed alpha
Helix 252
BB9
O
118 126Right-handed alpha
Helix 253
BC1
O
142 154Right-handed alpha
Helix 254
BC2
O
168 171Right-handed 310
Helix 255
BC3
O
214 226Right-handed alpha
Helix 256
BC4
O
237 246Right-handed alpha
Helix 257
BC5
O
253 257Right-handed alpha
Helix 258
BC6
O
273 283Right-handed alpha
Helix 259
BC7
O
284 286Right-handed 310
Helix 260
BC8
O
393 401Right-handed alpha
Helix 261
BC9
O
412 418Right-handed alpha
Helix 262
BD1
P
9 12Right-handed 310
Helix 263
BD2
P
24 32Right-handed 310
Helix 264
BD3
P
35 38Right-handed 310
Helix 265
BD4
P
47 59Right-handed alpha
Helix 266
BD5
P
71 82Right-handed alpha
Helix 267
BD6
P
86 90Right-handed 310
Helix 268
BD7
P
110 117Right-handed alpha
Helix 269
BD8
P
118 123Right-handed alpha
Helix 270
BD9
P
124 126Right-handed 310
Helix 271
BE1
P
142 154Right-handed alpha
Helix 272
BE2
P
167 171Right-handed 310
Helix 273
BE3
P
214 226Right-handed alpha
Helix 274
BE4
P
237 246Right-handed alpha
Helix 275
BE5
P
253 257Right-handed alpha
Helix 276
BE6
P
273 274Right-handed 310
Helix 277
BE7
P
276 276Right-handed 310
Helix 278
BE8
P
277 283Right-handed alpha
Helix 279
BE9
P
284 286Right-handed 310
Helix 280
BF1
P
393 401Right-handed alpha
Helix 281
BF2
P
412 419Right-handed alpha
Helix 282
BF3
Q
9 12Right-handed 310
Helix 283
BF4
Q
24 32Right-handed 310
Helix 284
BF5
Q
35 38Right-handed 310
Helix 285
BF6
Q
48 58Right-handed alpha
Helix 286
BF7
Q
71 82Right-handed alpha
Helix 287
BF8
Q
86 90Right-handed 310
Helix 288
BF9
Q
110 117Right-handed alpha
Helix 289
BG1
Q
118 123Right-handed alpha
Helix 290
BG2
Q
124 126Right-handed 310
Helix 291
BG3
Q
142 154Right-handed alpha
Helix 292
BG4
Q
167 171Right-handed 310
Helix 293
BG5
Q
214 227Right-handed alpha
Helix 294
BG6
Q
237 246Right-handed alpha
Helix 295
BG7
Q
254 256Right-handed 310
Helix 296
BG8
Q
273 283Right-handed alpha
Helix 297
BG9
Q
284 286Right-handed 310
Helix 298
BH1
Q
393 401Right-handed alpha
Helix 299
BH2
Q
412 417Right-handed alpha
Helix 300
BH3
R
9 12Right-handed 310
Helix 301
BH4
R
24 32Right-handed 310
Helix 302
BH5
R
35 38Right-handed 310
Helix 303
BH6
R
48 58Right-handed alpha
Helix 304
BH7
R
71 82Right-handed alpha
Helix 305
BH8
R
86 90Right-handed 310
Helix 306
BH9
R
112 117Right-handed alpha
Helix 307
BI1
R
118 126Right-handed alpha
Helix 308
BI2
R
142 154Right-handed alpha
Helix 309
BI3
R
168 171Right-handed 310
Helix 310
BI4
R
214 227Right-handed alpha
Helix 311
BI5
R
237 246Right-handed alpha
Helix 312
BI6
R
253 257Right-handed alpha
Helix 313
BI7
R
273 283Right-handed alpha
Helix 314
BI8
R
284 286Right-handed 310
Helix 315
BI9
R
393 401Right-handed alpha
Helix 316
BJ1
R
412 418Right-handed alpha
Helix 317
BJ2
Z
9 12Right-handed 310
Helix 318
BJ3
Z
24 32Right-handed 310
Helix 319
BJ4
Z
35 38Right-handed 310
Helix 320
BJ5
Z
48 58Right-handed alpha
Helix 321
BJ6
Z
71 82Right-handed alpha
Helix 322
BJ7
Z
86 90Right-handed 310
Helix 323
BJ8
Z
110 117Right-handed alpha
Helix 324
BJ9
Z
118 123Right-handed alpha
Helix 325
BK1
Z
124 126Right-handed 310
Helix 326
BK2
Z
142 154Right-handed alpha
Helix 327
BK3
Z
167 171Right-handed 310
Helix 328
BK4
Z
214 227Right-handed alpha
Helix 329
BK5
Z
237 246Right-handed alpha
Helix 330
BK6
Z
253 257Right-handed alpha
Helix 331
BK7
Z
273 283Right-handed alpha
Helix 332
BK8
Z
284 286Right-handed 310
Helix 333
BK9
Z
393 401Right-handed alpha
Helix 334
BL1
Z
412 418Right-handed alpha
Helix 335
BL2
T
9 12Right-handed 310
Helix 336
BL3
T
24 32Right-handed 310
Helix 337
BL4
T
35 38Right-handed 310
Helix 338
BL5
T
47 59Right-handed alpha
Helix 339
BL6
T
71 82Right-handed alpha
Helix 340
BL7
T
86 90Right-handed 310
Helix 341
BL8
T
110 117Right-handed alpha
Helix 342
BL9
T
118 123Right-handed alpha
Helix 343
BM1
T
124 126Right-handed 310
Helix 344
BM2
T
142 154Right-handed alpha
Helix 345
BM3
T
167 171Right-handed 310
Helix 346
BM4
T
214 227Right-handed alpha
Helix 347
BM5
T
237 246Right-handed alpha
Helix 348
BM6
T
253 257Right-handed alpha
Helix 349
BM7
T
273 284Right-handed alpha
Helix 350
BM8
T
393 401Right-handed alpha
Helix 351
BM9
T
412 418Right-handed alpha
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