Analysis of interatomic Contacts of Structural Units in PDB entry:
5W6J

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5W6J entry

There are 4 chains in PDB entry 5W6J (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 4	LEU 421
B	VAL 7	LEU 421
C	VAL 7	LEU 421
D	VAL 7	VAL 39

There are348 helices in PDB entry 5W6J. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	9	12	Right-handed 310
Helix 2	AA2	A	24	32	Right-handed 310
Helix 3	AA3	A	35	38	Right-handed 310
Helix 4	AA4	A	48	59	Right-handed alpha
Helix 5	AA5	A	71	82	Right-handed alpha
Helix 6	AA6	A	86	90	Right-handed 310
Helix 7	AA7	A	112	117	Right-handed alpha
Helix 8	AA8	A	118	126	Right-handed alpha
Helix 9	AA9	A	142	154	Right-handed alpha
Helix 10	AB1	A	167	171	Right-handed 310
Helix 11	AB2	A	214	226	Right-handed alpha
Helix 12	AB3	A	237	246	Right-handed alpha
Helix 13	AB4	A	253	257	Right-handed alpha
Helix 14	AB5	A	273	283	Right-handed alpha
Helix 15	AB6	A	284	286	Right-handed 310
Helix 16	AB7	A	393	401	Right-handed alpha
Helix 17	AB8	A	412	417	Right-handed alpha
Helix 18	AB9	B	9	12	Right-handed 310
Helix 19	AC1	B	24	31	Right-handed 310
Helix 20	AC2	B	35	39	Right-handed 310
Helix 21	AC3	B	48	58	Right-handed alpha
Helix 22	AC4	B	71	82	Right-handed alpha
Helix 23	AC5	B	86	90	Right-handed 310
Helix 24	AC6	B	110	117	Right-handed alpha
Helix 25	AC7	B	118	123	Right-handed alpha
Helix 26	AC8	B	124	126	Right-handed 310
Helix 27	AC9	B	142	154	Right-handed alpha
Helix 28	AD1	B	167	171	Right-handed 310
Helix 29	AD2	B	214	227	Right-handed alpha
Helix 30	AD3	B	237	245	Right-handed alpha
Helix 31	AD4	B	253	257	Right-handed alpha
Helix 32	AD5	B	273	283	Right-handed alpha
Helix 33	AD6	B	284	286	Right-handed 310
Helix 34	AD7	B	393	401	Right-handed alpha
Helix 35	AD8	B	412	418	Right-handed alpha
Helix 36	AD9	C	9	12	Right-handed 310
Helix 37	AE1	C	24	32	Right-handed 310
Helix 38	AE2	C	35	39	Right-handed 310
Helix 39	AE3	C	48	59	Right-handed alpha
Helix 40	AE4	C	71	82	Right-handed alpha
Helix 41	AE5	C	86	90	Right-handed 310
Helix 42	AE6	C	110	117	Right-handed alpha
Helix 43	AE7	C	118	123	Right-handed alpha
Helix 44	AE8	C	142	154	Right-handed alpha
Helix 45	AE9	C	168	171	Right-handed 310
Helix 46	AF1	C	214	226	Right-handed alpha
Helix 47	AF2	C	237	246	Right-handed alpha
Helix 48	AF3	C	253	257	Right-handed alpha
Helix 49	AF4	C	273	283	Right-handed alpha
Helix 50	AF5	C	284	286	Right-handed 310
Helix 51	AF6	C	393	401	Right-handed alpha
Helix 52	AF7	C	412	418	Right-handed alpha
Helix 53	AF8	D	9	12	Right-handed 310
Helix 54	AF9	D	24	32	Right-handed 310
Helix 55	AG1	D	35	38	Right-handed 310
Helix 56	AG2	D	47	58	Right-handed alpha
Helix 57	AG3	D	71	82	Right-handed alpha
Helix 58	AG4	D	86	90	Right-handed 310
Helix 59	AG5	D	110	117	Right-handed alpha
Helix 60	AG6	D	118	123	Right-handed alpha
Helix 61	AG7	D	142	154	Right-handed alpha
Helix 62	AG8	D	168	171	Right-handed 310
Helix 63	AG9	D	214	226	Right-handed alpha
Helix 64	AH1	D	237	246	Right-handed alpha
Helix 65	AH2	D	254	256	Right-handed 310
Helix 66	AH3	D	273	283	Right-handed alpha
Helix 67	AH4	D	284	286	Right-handed 310
Helix 68	AH5	D	393	401	Right-handed alpha
Helix 69	AH6	D	412	417	Right-handed alpha
Helix 70	AH7	E	9	12	Right-handed 310
Helix 71	AH8	E	27	32	Right-handed 310
Helix 72	AH9	E	35	39	Right-handed 310
Helix 73	AI1	E	48	59	Right-handed alpha
Helix 74	AI2	E	71	82	Right-handed alpha
Helix 75	AI3	E	86	90	Right-handed 310
Helix 76	AI4	E	112	117	Right-handed alpha
Helix 77	AI5	E	118	126	Right-handed alpha
Helix 78	AI6	E	142	154	Right-handed alpha
Helix 79	AI7	E	168	171	Right-handed 310
Helix 80	AI8	E	214	226	Right-handed alpha
Helix 81	AI9	E	237	246	Right-handed alpha
Helix 82	AJ1	E	253	257	Right-handed alpha
Helix 83	AJ2	E	273	283	Right-handed alpha
Helix 84	AJ3	E	284	286	Right-handed 310
Helix 85	AJ4	E	393	401	Right-handed alpha
Helix 86	AJ5	E	412	418	Right-handed alpha
Helix 87	AJ6	H	9	12	Right-handed 310
Helix 88	AJ7	H	24	32	Right-handed 310
Helix 89	AJ8	H	35	38	Right-handed 310
Helix 90	AJ9	H	47	59	Right-handed alpha
Helix 91	AK1	H	71	82	Right-handed alpha
Helix 92	AK2	H	86	90	Right-handed 310
Helix 93	AK3	H	111	117	Right-handed alpha
Helix 94	AK4	H	118	126	Right-handed alpha
Helix 95	AK5	H	142	154	Right-handed alpha
Helix 96	AK6	H	167	171	Right-handed 310
Helix 97	AK7	H	214	222	Right-handed alpha
Helix 98	AK8	H	237	246	Right-handed alpha
Helix 99	AK9	H	254	256	Right-handed 310
Helix 100	AL1	H	273	283	Right-handed alpha
Helix 101	AL2	H	284	286	Right-handed 310
Helix 102	AL3	H	393	401	Right-handed alpha
Helix 103	AL4	H	412	417	Right-handed alpha
Helix 104	AL5	I	9	12	Right-handed 310
Helix 105	AL6	I	24	32	Right-handed 310
Helix 106	AL7	I	35	39	Right-handed 310
Helix 107	AL8	I	48	59	Right-handed alpha
Helix 108	AL9	I	71	82	Right-handed alpha
Helix 109	AM1	I	86	90	Right-handed 310
Helix 110	AM2	I	112	117	Right-handed alpha
Helix 111	AM3	I	118	123	Right-handed alpha
Helix 112	AM4	I	124	126	Right-handed 310
Helix 113	AM5	I	142	154	Right-handed alpha
Helix 114	AM6	I	167	171	Right-handed 310
Helix 115	AM7	I	214	226	Right-handed alpha
Helix 116	AM8	I	233	238	Right-handed alpha
Helix 117	AM9	I	238	246	Right-handed alpha
Helix 118	AN1	I	253	257	Right-handed alpha
Helix 119	AN2	I	273	283	Right-handed alpha
Helix 120	AN3	I	284	286	Right-handed 310
Helix 121	AN4	I	393	401	Right-handed alpha
Helix 122	AN5	I	412	417	Right-handed alpha
Helix 123	AN6	J	9	12	Right-handed 310
Helix 124	AN7	J	24	32	Right-handed 310
Helix 125	AN8	J	35	38	Right-handed 310
Helix 126	AN9	J	48	58	Right-handed alpha
Helix 127	AO1	J	71	82	Right-handed alpha
Helix 128	AO2	J	86	90	Right-handed 310
Helix 129	AO3	J	110	117	Right-handed alpha
Helix 130	AO4	J	118	123	Right-handed alpha
Helix 131	AO5	J	142	154	Right-handed alpha
Helix 132	AO6	J	166	170	Right-handed alpha
Helix 133	AO7	J	214	226	Right-handed alpha
Helix 134	AO8	J	237	246	Right-handed alpha
Helix 135	AO9	J	253	257	Right-handed alpha
Helix 136	AP1	J	273	283	Right-handed alpha
Helix 137	AP2	J	284	286	Right-handed 310
Helix 138	AP3	J	393	401	Right-handed alpha
Helix 139	AP4	J	412	417	Right-handed alpha
Helix 140	AP5	K	9	12	Right-handed 310
Helix 141	AP6	K	24	32	Right-handed 310
Helix 142	AP7	K	35	38	Right-handed 310
Helix 143	AP8	K	48	59	Right-handed alpha
Helix 144	AP9	K	71	82	Right-handed alpha
Helix 145	AQ1	K	86	90	Right-handed 310
Helix 146	AQ2	K	112	117	Right-handed alpha
Helix 147	AQ3	K	118	126	Right-handed alpha
Helix 148	AQ4	K	142	154	Right-handed alpha
Helix 149	AQ5	K	168	171	Right-handed 310
Helix 150	AQ6	K	214	227	Right-handed alpha
Helix 151	AQ7	K	239	244	Right-handed alpha
Helix 152	AQ8	K	253	257	Right-handed alpha
Helix 153	AQ9	K	273	283	Right-handed alpha
Helix 154	AR1	K	284	286	Right-handed 310
Helix 155	AR2	K	393	401	Right-handed alpha
Helix 156	AR3	K	412	417	Right-handed alpha
Helix 157	AR4	L	9	12	Right-handed 310
Helix 158	AR5	L	24	32	Right-handed 310
Helix 159	AR6	L	35	39	Right-handed 310
Helix 160	AR7	L	48	58	Right-handed alpha
Helix 161	AR8	L	71	82	Right-handed alpha
Helix 162	AR9	L	86	90	Right-handed 310
Helix 163	AS1	L	112	117	Right-handed alpha
Helix 164	AS2	L	118	126	Right-handed alpha
Helix 165	AS3	L	143	154	Right-handed alpha
Helix 166	AS4	L	214	223	Right-handed alpha
Helix 167	AS5	L	237	245	Right-handed alpha
Helix 168	AS6	L	253	257	Right-handed alpha
Helix 169	AS7	L	273	283	Right-handed alpha
Helix 170	AS8	L	284	286	Right-handed 310
Helix 171	AS9	L	393	401	Right-handed alpha
Helix 172	AT1	L	412	418	Right-handed alpha
Helix 173	AT2	N	9	12	Right-handed 310
Helix 174	AT3	N	24	32	Right-handed 310
Helix 175	AT4	N	35	39	Right-handed 310
Helix 176	AT5	N	48	58	Right-handed alpha
Helix 177	AT6	N	71	82	Right-handed alpha
Helix 178	AT7	N	86	90	Right-handed 310
Helix 179	AT8	N	112	117	Right-handed alpha
Helix 180	AT9	N	118	123	Right-handed alpha
Helix 181	AU1	N	124	126	Right-handed 310
Helix 182	AU2	N	142	154	Right-handed alpha
Helix 183	AU3	N	167	172	Right-handed 310
Helix 184	AU4	N	214	225	Right-handed alpha
Helix 185	AU5	N	237	245	Right-handed alpha
Helix 186	AU6	N	254	256	Right-handed 310
Helix 187	AU7	N	273	283	Right-handed alpha
Helix 188	AU8	N	284	286	Right-handed 310
Helix 189	AU9	N	393	401	Right-handed alpha
Helix 190	AV1	N	412	418	Right-handed alpha
Helix 191	AV2	O	9	12	Right-handed 310
Helix 192	AV3	O	24	32	Right-handed 310
Helix 193	AV4	O	35	38	Right-handed 310
Helix 194	AV5	O	48	58	Right-handed alpha
Helix 195	AV6	O	71	82	Right-handed alpha
Helix 196	AV7	O	86	90	Right-handed 310
Helix 197	AV8	O	110	117	Right-handed alpha
Helix 198	AV9	O	118	123	Right-handed alpha
Helix 199	AW1	O	124	126	Right-handed 310
Helix 200	AW2	O	142	154	Right-handed alpha
Helix 201	AW3	O	167	171	Right-handed 310
Helix 202	AW4	O	214	226	Right-handed alpha
Helix 203	AW5	O	238	246	Right-handed alpha
Helix 204	AW6	O	253	257	Right-handed alpha
Helix 205	AW7	O	273	283	Right-handed alpha
Helix 206	AW8	O	284	286	Right-handed 310
Helix 207	AW9	O	393	401	Right-handed alpha
Helix 208	AX1	O	412	417	Right-handed alpha
Helix 209	AX2	P	9	12	Right-handed 310
Helix 210	AX3	P	24	32	Right-handed 310
Helix 211	AX4	P	35	38	Right-handed 310
Helix 212	AX5	P	48	59	Right-handed alpha
Helix 213	AX6	P	71	82	Right-handed alpha
Helix 214	AX7	P	86	90	Right-handed 310
Helix 215	AX8	P	111	117	Right-handed alpha
Helix 216	AX9	P	118	123	Right-handed alpha
Helix 217	AY1	P	142	154	Right-handed alpha
Helix 218	AY2	P	168	171	Right-handed 310
Helix 219	AY3	P	214	225	Right-handed alpha
Helix 220	AY4	P	237	246	Right-handed alpha
Helix 221	AY5	P	253	257	Right-handed alpha
Helix 222	AY6	P	273	283	Right-handed alpha
Helix 223	AY7	P	284	286	Right-handed 310
Helix 224	AY8	P	393	401	Right-handed alpha
Helix 225	AY9	P	412	418	Right-handed alpha
Helix 226	AZ1	Q	9	12	Right-handed 310
Helix 227	AZ2	Q	24	32	Right-handed 310
Helix 228	AZ3	Q	35	38	Right-handed 310
Helix 229	AZ4	Q	48	59	Right-handed alpha
Helix 230	AZ5	Q	71	82	Right-handed alpha
Helix 231	AZ6	Q	86	90	Right-handed 310
Helix 232	AZ7	Q	112	117	Right-handed alpha
Helix 233	AZ8	Q	118	123	Right-handed alpha
Helix 234	AZ9	Q	142	153	Right-handed alpha
Helix 235	BA1	Q	167	171	Right-handed 310
Helix 236	BA2	Q	214	223	Right-handed alpha
Helix 237	BA3	Q	238	246	Right-handed alpha
Helix 238	BA4	Q	254	256	Right-handed 310
Helix 239	BA5	Q	273	283	Right-handed alpha
Helix 240	BA6	Q	284	286	Right-handed 310
Helix 241	BA7	Q	395	401	Right-handed alpha
Helix 242	BA8	Q	412	418	Right-handed alpha
Helix 243	BA9	R	9	12	Right-handed 310
Helix 244	BB1	R	24	32	Right-handed 310
Helix 245	BB2	R	35	39	Right-handed 310
Helix 246	BB3	R	48	58	Right-handed alpha
Helix 247	BB4	R	71	82	Right-handed alpha
Helix 248	BB5	R	86	90	Right-handed 310
Helix 249	BB6	R	110	117	Right-handed alpha
Helix 250	BB7	R	118	126	Right-handed alpha
Helix 251	BB8	R	142	154	Right-handed alpha
Helix 252	BB9	R	167	171	Right-handed 310
Helix 253	BC1	R	214	221	Right-handed alpha
Helix 254	BC2	R	237	246	Right-handed alpha
Helix 255	BC3	R	253	257	Right-handed alpha
Helix 256	BC4	R	273	283	Right-handed alpha
Helix 257	BC5	R	284	286	Right-handed 310
Helix 258	BC6	R	393	401	Right-handed alpha
Helix 259	BC7	R	412	418	Right-handed alpha
Helix 260	BC8	F	9	12	Right-handed 310
Helix 261	BC9	F	24	32	Right-handed 310
Helix 262	BD1	F	35	38	Right-handed 310
Helix 263	BD2	F	47	59	Right-handed alpha
Helix 264	BD3	F	71	82	Right-handed alpha
Helix 265	BD4	F	86	90	Right-handed 310
Helix 266	BD5	F	110	117	Right-handed alpha
Helix 267	BD6	F	118	126	Right-handed alpha
Helix 268	BD7	F	142	154	Right-handed alpha
Helix 269	BD8	F	166	170	Right-handed alpha
Helix 270	BD9	F	214	226	Right-handed alpha
Helix 271	BE1	F	237	246	Right-handed alpha
Helix 272	BE2	F	253	257	Right-handed alpha
Helix 273	BE3	F	273	283	Right-handed alpha
Helix 274	BE4	F	284	286	Right-handed 310
Helix 275	BE5	F	393	401	Right-handed alpha
Helix 276	BE6	F	412	418	Right-handed alpha
Helix 277	BE7	G	9	12	Right-handed 310
Helix 278	BE8	G	24	32	Right-handed 310
Helix 279	BE9	G	35	38	Right-handed 310
Helix 280	BF1	G	47	58	Right-handed alpha
Helix 281	BF2	G	71	82	Right-handed alpha
Helix 282	BF3	G	86	90	Right-handed 310
Helix 283	BF4	G	110	117	Right-handed alpha
Helix 284	BF5	G	118	126	Right-handed alpha
Helix 285	BF6	G	142	154	Right-handed alpha
Helix 286	BF7	G	167	171	Right-handed 310
Helix 287	BF8	G	214	226	Right-handed alpha
Helix 288	BF9	G	233	238	Right-handed alpha
Helix 289	BG1	G	238	245	Right-handed alpha
Helix 290	BG2	G	253	257	Right-handed alpha
Helix 291	BG3	G	273	283	Right-handed alpha
Helix 292	BG4	G	284	286	Right-handed 310
Helix 293	BG5	G	393	401	Right-handed alpha
Helix 294	BG6	G	412	419	Right-handed alpha
Helix 295	BG7	M	9	12	Right-handed 310
Helix 296	BG8	M	24	32	Right-handed 310
Helix 297	BG9	M	35	38	Right-handed 310
Helix 298	BH1	M	47	58	Right-handed alpha
Helix 299	BH2	M	71	82	Right-handed alpha
Helix 300	BH3	M	86	90	Right-handed 310
Helix 301	BH4	M	112	117	Right-handed alpha
Helix 302	BH5	M	118	126	Right-handed alpha
Helix 303	BH6	M	142	151	Right-handed alpha
Helix 304	BH7	M	168	171	Right-handed 310
Helix 305	BH8	M	214	227	Right-handed alpha
Helix 306	BH9	M	237	245	Right-handed alpha
Helix 307	BI1	M	254	256	Right-handed 310
Helix 308	BI2	M	273	283	Right-handed alpha
Helix 309	BI3	M	284	286	Right-handed 310
Helix 310	BI4	M	393	401	Right-handed alpha
Helix 311	BI5	M	412	418	Right-handed alpha
Helix 312	BI6	T	9	12	Right-handed 310
Helix 313	BI7	T	24	32	Right-handed 310
Helix 314	BI8	T	35	39	Right-handed 310
Helix 315	BI9	T	47	59	Right-handed alpha
Helix 316	BJ1	T	71	82	Right-handed alpha
Helix 317	BJ2	T	86	90	Right-handed 310
Helix 318	BJ3	T	99	103	Right-handed 310
Helix 319	BJ4	T	112	117	Right-handed alpha
Helix 320	BJ5	T	118	123	Right-handed alpha
Helix 321	BJ6	T	124	126	Right-handed 310
Helix 322	BJ7	T	142	154	Right-handed alpha
Helix 323	BJ8	T	166	170	Right-handed alpha
Helix 324	BJ9	T	214	227	Right-handed alpha
Helix 325	BK1	T	237	245	Right-handed alpha
Helix 326	BK2	T	253	257	Right-handed alpha
Helix 327	BK3	T	273	283	Right-handed alpha
Helix 328	BK4	T	284	286	Right-handed 310
Helix 329	BK5	T	393	401	Right-handed alpha
Helix 330	BK6	T	412	417	Right-handed alpha
Helix 331	BK7	U	9	12	Right-handed 310
Helix 332	BK8	U	24	32	Right-handed 310
Helix 333	BK9	U	35	38	Right-handed 310
Helix 334	BL1	U	47	59	Right-handed alpha
Helix 335	BL2	U	71	82	Right-handed alpha
Helix 336	BL3	U	86	90	Right-handed 310
Helix 337	BL4	U	112	117	Right-handed alpha
Helix 338	BL5	U	118	123	Right-handed alpha
Helix 339	BL6	U	124	126	Right-handed 310
Helix 340	BL7	U	142	154	Right-handed alpha
Helix 341	BL8	U	167	171	Right-handed 310
Helix 342	BL9	U	214	226	Right-handed alpha
Helix 343	BM1	U	237	246	Right-handed alpha
Helix 344	BM2	U	253	257	Right-handed alpha
Helix 345	BM3	U	273	283	Right-handed alpha
Helix 346	BM4	U	284	286	Right-handed 310
Helix 347	BM5	U	393	401	Right-handed alpha
Helix 348	BM6	U	412	418	Right-handed alpha

Analysis of interatomic Contacts of Structural Units in PDB entry: 5W6J

Analysis of interatomic Contacts of Structural Units in PDB entry:
5W6J