Analysis of interatomic Contacts of Structural Units in PDB entry:
5XA0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XA0 entry

There are 2 chains in PDB entry 5XA0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 7PRO 1493
B
SER 7PRO 1493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are111 helices in PDB entry 5XA0. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
21 24Right-handed 310
Helix 2
AA2
A
67 76Right-handed alpha
Helix 3
AA3
A
86 110Right-handed alpha
Helix 4
AA4
A
277 281Right-handed 310
Helix 5
AA5
A
363 366Right-handed 310
Helix 6
AA6
A
436 463Right-handed alpha
Helix 7
AA7
A
466 484Right-handed alpha
Helix 8
AA8
A
503 513Right-handed alpha
Helix 9
AA9
A
515 523Right-handed alpha
Helix 10
AB1
A
552 563Right-handed alpha
Helix 11
AB2
A
569 576Right-handed 310
Helix 12
AB3
A
577 588Right-handed alpha
Helix 13
AB4
A
589 602Right-handed alpha
Helix 14
AB5
A
608 626Right-handed alpha
Helix 15
AB6
A
628 638Right-handed alpha
Helix 16
AB7
A
640 658Right-handed alpha
Helix 17
AB8
A
668 679Right-handed alpha
Helix 18
AB9
A
685 702Right-handed alpha
Helix 19
AC1
A
709 714Right-handed alpha
Helix 20
AC2
A
725 736Right-handed alpha
Helix 21
AC3
A
749 759Right-handed alpha
Helix 22
AC4
A
762 773Right-handed alpha
Helix 23
AC5
A
775 788Right-handed alpha
Helix 24
AC6
A
829 849Right-handed alpha
Helix 25
AC7
A
855 877Right-handed alpha
Helix 26
AC8
A
882 897Right-handed alpha
Helix 27
AC9
A
960 963Right-handed 310
Helix 28
AD1
A
964 989Right-handed alpha
Helix 29
AD2
A
991 997Right-handed alpha
Helix 30
AD3
A
1029 1031Right-handed 310
Helix 31
AD4
A
1032 1044Right-handed alpha
Helix 32
AD5
A
1049 1054Right-handed alpha
Helix 33
AD6
A
1060 1067Right-handed alpha
Helix 34
AD7
A
1075 1085Right-handed alpha
Helix 35
AD8
A
1086 1088Right-handed 310
Helix 36
AD9
A
1094 1103Right-handed alpha
Helix 37
AE1
A
1107 1116Right-handed alpha
Helix 38
AE2
A
1118 1132Right-handed alpha
Helix 39
AE3
A
1177 1192Right-handed alpha
Helix 40
AE4
A
1195 1200Right-handed alpha
Helix 41
AE5
A
1207 1212Right-handed alpha
Helix 42
AE6
A
1212 1220Right-handed alpha
Helix 43
AE7
A
1234 1239Right-handed alpha
Helix 44
AE8
A
1272 1284Right-handed alpha
Helix 45
AE9
A
1291 1298Right-handed alpha
Helix 46
AF1
A
1303 1310Right-handed alpha
Helix 47
AF2
A
1312 1321Right-handed alpha
Helix 48
AF3
A
1323 1335Right-handed alpha
Helix 49
AF4
A
1356 1362Right-handed alpha
Helix 50
AF5
A
1372 1384Right-handed alpha
Helix 51
AF6
A
1387 1392Right-handed alpha
Helix 52
AF7
A
1400 1413Right-handed alpha
Helix 53
AF8
A
1417 1432Right-handed alpha
Helix 54
AF9
A
1435 1441Right-handed alpha
Helix 55
AG1
A
1448 1454Right-handed alpha
Helix 56
AG2
A
1471 1489Right-handed alpha
Helix 57
AG3
B
66 73Right-handed alpha
Helix 58
AG4
B
86 107Right-handed alpha
Helix 59
AG5
B
156 159Right-handed 310
Helix 60
AG6
B
436 463Right-handed alpha
Helix 61
AG7
B
466 483Right-handed alpha
Helix 62
AG8
B
503 513Right-handed alpha
Helix 63
AG9
B
514 522Right-handed alpha
Helix 64
AH1
B
552 565Right-handed alpha
Helix 65
AH2
B
569 574Right-handed alpha
Helix 66
AH3
B
577 579Right-handed 310
Helix 67
AH4
B
580 586Right-handed alpha
Helix 68
AH5
B
591 603Right-handed alpha
Helix 69
AH6
B
605 625Right-handed alpha
Helix 70
AH7
B
629 638Right-handed alpha
Helix 71
AH8
B
643 658Right-handed alpha
Helix 72
AH9
B
667 680Right-handed alpha
Helix 73
AI1
B
689 701Right-handed alpha
Helix 74
AI2
B
708 713Right-handed alpha
Helix 75
AI3
B
718 722Right-handed 310
Helix 76
AI4
B
726 735Right-handed alpha
Helix 77
AI5
B
750 758Right-handed alpha
Helix 78
AI6
B
759 761Right-handed 310
Helix 79
AI7
B
762 772Right-handed alpha
Helix 80
AI8
B
775 788Right-handed alpha
Helix 81
AI9
B
826 846Right-handed alpha
Helix 82
AJ1
B
847 849Right-handed 310
Helix 83
AJ2
B
851 856Right-handed alpha
Helix 84
AJ3
B
857 877Right-handed alpha
Helix 85
AJ4
B
882 893Right-handed alpha
Helix 86
AJ5
B
964 986Right-handed alpha
Helix 87
AJ6
B
992 998Right-handed alpha
Helix 88
AJ7
B
1028 1045Right-handed alpha
Helix 89
AJ8
B
1060 1068Right-handed alpha
Helix 90
AJ9
B
1075 1086Right-handed alpha
Helix 91
AK1
B
1094 1102Right-handed alpha
Helix 92
AK2
B
1108 1116Right-handed alpha
Helix 93
AK3
B
1119 1133Right-handed alpha
Helix 94
AK4
B
1177 1191Right-handed alpha
Helix 95
AK5
B
1195 1200Right-handed alpha
Helix 96
AK6
B
1202 1206Right-handed 310
Helix 97
AK7
B
1207 1219Right-handed alpha
Helix 98
AK8
B
1229 1236Right-handed alpha
Helix 99
AK9
B
1249 1255Right-handed alpha
Helix 100
AL1
B
1270 1285Right-handed alpha
Helix 101
AL2
B
1290 1300Right-handed alpha
Helix 102
AL3
B
1303 1310Right-handed alpha
Helix 103
AL4
B
1312 1320Right-handed alpha
Helix 104
AL5
B
1323 1336Right-handed alpha
Helix 105
AL6
B
1358 1365Right-handed alpha
Helix 106
AL7
B
1376 1384Right-handed alpha
Helix 107
AL8
B
1401 1411Right-handed alpha
Helix 108
AL9
B
1417 1432Right-handed alpha
Helix 109
AM1
B
1435 1441Right-handed alpha
Helix 110
AM2
B
1447 1458Right-handed alpha
Helix 111
AM3
B
1474 1486Right-handed alpha
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There are 17 sheets in PDB entry 5XA0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
17 19first strand
Strand 2
A
218 220anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
26 27first strand
Strand 2
A
39 40anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
58 60first strand
Strand 2
A
123 125anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
132 135first strand
Strand 2
A
148 151anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
163 164first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
242 244first strand
Strand 2
A
430 432anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
251 252first strand
Strand 2
A
263 264anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
255 256first strand
Strand 2
A
259 260anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
284 285first strand
Strand 2
A
304 307anti-parallel
Strand 3
A
312 316anti-parallel
Strand 4
A
355 357anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
368 371first strand
Strand 2
A
389 392anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
122 125first strand
Strand 2
B
58 61anti-parallel
Strand 3
B
14 18anti-parallel
Strand 4
B
219 221anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
27 29first strand
Strand 2
B
37 39anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
161 165first strand
Strand 2
B
182 186anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
238 239first strand
Strand 2
B
283 284anti-parallel
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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
251 256first strand
Strand 2
B
259 264anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
313 317first strand
Strand 2
B
354 358anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
370 371first strand
Strand 2
B
389 390anti-parallel
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