Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for XXXX entry
Note, this PDB entry contains
modified residue(s) PHOSPHOSERINE (SEP) . This residue is
treated as heterogroup (ligand) both in the
PDB entry and in LPC/CSU analysis.
There are 33 chains in PDB entry XXXX
(CSU analysis of residue contacts immediately below table)
Chain ID |
Initial residue | Terminal residue |
A
|
MET 25 | ALA 2335 |
B
|
G 8 | C 104 |
C
|
GLU 56 | LEU 943 |
D
|
ALA 404 | ASP 2125 |
E
|
PRO 58 | ILE 356 |
F
|
G 1 | U 97 |
G
|
G -23 | U 150 |
H
|
A 1 | C 184 |
I
|
LEU 156 | ILE 819 |
J
|
VAL 179 | PHE 802 |
K
|
VAL 13 | ILE 199 |
L
|
ILE 6 | LYS 795 |
M
|
LYS 114 | VAL 243 |
N
|
MET 1 | SER 143 |
O
|
ASP 19 | GLY 303 |
P
|
THR 2 | LYS 229 |
Q
|
ASN 19 | GLN 1381 |
R
|
ILE 51 | PRO 223 |
R
|
PRO 225 | HIS 231 |
R
|
PRO 233 | GLU 316 |
S
|
SER 8 | GLY 166 |
T
|
THR 184 | THR 496 |
U
|
MET 1 | VAL 26 |
V
|
LYS 149 | LYS 648 |
W
|
PRO 83 | TRP 578 |
X
|
LYS 51 | LYS 142 |
Y
|
ARG 393 | LYS 1188 |
Z
|
HIS 62 | SER 371 |
a
|
ILE 3 | SER 85 |
b
|
GLY 4 | ASP 89 |
c
|
MET 1 | ASP 82 |
d
|
GLU 20 | ALA 116 |
f
|
SER 2 | VAL 75 |
Back to top of page
There are no helices in PDB entry
XXXX
There are no sheets in PDB entry
XXXX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il