Analysis of interatomic Contacts of Structural Units in PDB entry:
5XTE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5XTE entry

There are 22 chains in PDB entry 5XTE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 2	LYS 82
B	MET 1	GLY 57
C	SER 79	GLY 274
D	ALA 2	LYS 63
E	GLU 18	LYS 91
F	ALA 6	LYS 111
G	VAL 2	PHE 52
H	SER 85	LYS 325
J	THR 2	TRP 379
K	PRO 35	LEU 453
L	THR 35	PHE 480
N	GLY 2	LYS 82
O	MET 1	GLY 57
P	SER 79	GLY 274
Q	ALA 2	LYS 63
R	GLU 18	LYS 91
S	ALA 6	LYS 111
T	VAL 2	PHE 52
U	SER 85	LYS 325
V	THR 2	TRP 379
W	PRO 35	LEU 453
Y	THR 35	PHE 480

There are193 helices in PDB entry 5XTE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	24	Right-handed 310
Helix 2	AA2	A	29	72	Right-handed alpha
Helix 3	AA3	A	73	82	Right-handed alpha
Helix 4	AA4	B	3	7	Right-handed 310
Helix 5	AA5	C	93	97	Right-handed 310
Helix 6	AA6	C	103	142	Right-handed alpha
Helix 7	AA7	C	143	150	Right-handed alpha
Helix 8	AA8	C	180	190	Right-handed alpha
Helix 9	AA9	C	200	205	Right-handed alpha
Helix 10	AB1	D	5	14	Right-handed alpha
Helix 11	AB2	D	17	48	Right-handed alpha
Helix 12	AB3	D	56	60	Right-handed 310
Helix 13	AB4	E	19	27	Right-handed alpha
Helix 14	AB5	E	28	40	Right-handed alpha
Helix 15	AB6	E	40	59	Right-handed alpha
Helix 16	AB7	E	67	84	Right-handed alpha
Helix 17	AB8	F	10	25	Right-handed alpha
Helix 18	AB9	F	26	31	Right-handed 310
Helix 19	AC1	F	33	38	Right-handed alpha
Helix 20	AC2	F	41	51	Right-handed alpha
Helix 21	AC3	F	52	73	Right-handed alpha
Helix 22	AC4	F	77	81	Right-handed 310
Helix 23	AC5	F	91	110	Right-handed alpha
Helix 24	AC6	F	111	111	Right-handed 310
Helix 25	AC7	G	2	6	Right-handed 310
Helix 26	AC8	G	7	36	Right-handed alpha
Helix 27	AC9	G	38	43	Right-handed alpha
Helix 28	AD1	H	96	100	Right-handed 310
Helix 29	AD2	H	106	118	Right-handed alpha
Helix 30	AD3	H	134	139	Right-handed alpha
Helix 31	AD4	H	141	150	Right-handed alpha
Helix 32	AD5	H	181	188	Right-handed alpha
Helix 33	AD6	H	199	204	Right-handed alpha
Helix 34	AD7	H	207	217	Right-handed alpha
Helix 35	AD8	H	262	279	Right-handed alpha
Helix 36	AD9	H	281	316	Right-handed alpha
Helix 37	AE1	J	3	8	Right-handed alpha
Helix 38	AE2	J	8	18	Right-handed alpha
Helix 39	AE3	J	28	30	Right-handed 310
Helix 40	AE4	J	31	53	Right-handed alpha
Helix 41	AE5	J	60	71	Right-handed alpha
Helix 42	AE6	J	75	104	Right-handed alpha
Helix 43	AE7	J	105	108	Right-handed 310
Helix 44	AE8	J	109	132	Right-handed alpha
Helix 45	AE9	J	136	149	Right-handed alpha
Helix 46	AF1	J	150	153	Right-handed 310
Helix 47	AF2	J	156	166	Right-handed alpha
Helix 48	AF3	J	171	201	Right-handed alpha
Helix 49	AF4	J	213	215	Right-handed 310
Helix 50	AF5	J	220	245	Right-handed alpha
Helix 51	AF6	J	271	284	Right-handed alpha
Helix 52	AF7	J	288	304	Right-handed alpha
Helix 53	AF8	J	305	308	Right-handed 310
Helix 54	AF9	J	314	317	Right-handed 310
Helix 55	AG1	J	318	340	Right-handed alpha
Helix 56	AG2	J	344	364	Right-handed alpha
Helix 57	AG3	J	364	377	Right-handed alpha
Helix 58	AG4	K	68	72	Right-handed 310
Helix 59	AG5	K	78	84	Right-handed alpha
Helix 60	AG6	K	85	89	Right-handed 310
Helix 61	AG7	K	95	107	Right-handed alpha
Helix 62	AG8	K	129	143	Right-handed alpha
Helix 63	AG9	K	147	155	Right-handed alpha
Helix 64	AH1	K	156	166	Right-handed alpha
Helix 65	AH2	K	168	182	Right-handed alpha
Helix 66	AH3	K	184	188	Right-handed 310
Helix 67	AH4	K	193	197	Right-handed 310
Helix 68	AH5	K	201	213	Right-handed alpha
Helix 69	AH6	K	226	234	Right-handed alpha
Helix 70	AH7	K	235	239	Right-handed 310
Helix 71	AH8	K	280	293	Right-handed alpha
Helix 72	AH9	K	307	315	Right-handed alpha
Helix 73	AI1	K	346	363	Right-handed alpha
Helix 74	AI2	K	367	388	Right-handed alpha
Helix 75	AI3	K	388	403	Right-handed alpha
Helix 76	AI4	K	408	419	Right-handed alpha
Helix 77	AI5	K	420	434	Right-handed alpha
Helix 78	AI6	L	37	45	Right-handed alpha
Helix 79	AI7	L	83	87	Right-handed 310
Helix 80	AI8	L	88	96	Right-handed alpha
Helix 81	AI9	L	105	117	Right-handed alpha
Helix 82	AJ1	L	139	151	Right-handed alpha
Helix 83	AJ2	L	157	176	Right-handed alpha
Helix 84	AJ3	L	180	193	Right-handed alpha
Helix 85	AJ4	L	195	199	Right-handed 310
Helix 86	AJ5	L	204	209	Right-handed alpha
Helix 87	AJ6	L	212	223	Right-handed alpha
Helix 88	AJ7	L	238	251	Right-handed alpha
Helix 89	AJ8	L	257	261	Right-handed 310
Helix 90	AJ9	L	299	312	Right-handed alpha
Helix 91	AK1	L	326	333	Right-handed alpha
Helix 92	AK2	L	364	381	Right-handed alpha
Helix 93	AK3	L	384	402	Right-handed alpha
Helix 94	AK4	L	405	420	Right-handed alpha
Helix 95	AK5	L	425	435	Right-handed alpha
Helix 96	AK6	L	437	449	Right-handed alpha
Helix 97	AK7	L	467	473	Right-handed alpha
Helix 98	AK8	L	474	476	Right-handed 310
Helix 99	AK9	N	4	8	Right-handed 310
Helix 100	AL1	N	20	24	Right-handed 310
Helix 101	AL2	N	29	82	Right-handed alpha
Helix 102	AL3	O	30	34	Right-handed 310
Helix 103	AL4	P	93	97	Right-handed 310
Helix 104	AL5	P	102	140	Right-handed alpha
Helix 105	AL6	P	143	150	Right-handed alpha
Helix 106	AL7	P	180	190	Right-handed alpha
Helix 107	AL8	P	200	205	Right-handed alpha
Helix 108	AL9	Q	5	13	Right-handed alpha
Helix 109	AM1	Q	17	48	Right-handed alpha
Helix 110	AM2	Q	52	60	Right-handed 310
Helix 111	AM3	R	19	27	Right-handed alpha
Helix 112	AM4	R	28	39	Right-handed alpha
Helix 113	AM5	R	40	60	Right-handed alpha
Helix 114	AM6	R	67	90	Right-handed alpha
Helix 115	AM7	S	8	25	Right-handed alpha
Helix 116	AM8	S	26	31	Right-handed 310
Helix 117	AM9	S	33	37	Right-handed 310
Helix 118	AN1	S	41	50	Right-handed alpha
Helix 119	AN2	S	52	72	Right-handed alpha
Helix 120	AN3	S	77	81	Right-handed 310
Helix 121	AN4	S	91	110	Right-handed alpha
Helix 122	AN5	T	2	6	Right-handed 310
Helix 123	AN6	T	7	37	Right-handed alpha
Helix 124	AN7	T	38	43	Right-handed alpha
Helix 125	AN8	U	106	118	Right-handed alpha
Helix 126	AN9	U	134	139	Right-handed alpha
Helix 127	AO1	U	141	152	Right-handed alpha
Helix 128	AO2	U	181	188	Right-handed alpha
Helix 129	AO3	U	199	204	Right-handed alpha
Helix 130	AO4	U	207	217	Right-handed alpha
Helix 131	AO5	U	262	279	Right-handed alpha
Helix 132	AO6	U	281	317	Right-handed alpha
Helix 133	AO7	V	3	7	Right-handed 310
Helix 134	AO8	V	8	18	Right-handed alpha
Helix 135	AO9	V	31	50	Right-handed alpha
Helix 136	AP1	V	61	71	Right-handed alpha
Helix 137	AP2	V	75	104	Right-handed alpha
Helix 138	AP3	V	105	108	Right-handed 310
Helix 139	AP4	V	109	133	Right-handed alpha
Helix 140	AP5	V	136	151	Right-handed alpha
Helix 141	AP6	V	156	166	Right-handed alpha
Helix 142	AP7	V	171	201	Right-handed alpha
Helix 143	AP8	V	213	215	Right-handed 310
Helix 144	AP9	V	223	245	Right-handed alpha
Helix 145	AQ1	V	271	273	Right-handed 310
Helix 146	AQ2	V	274	284	Right-handed alpha
Helix 147	AQ3	V	286	300	Right-handed alpha
Helix 148	AQ4	V	303	308	Right-handed alpha
Helix 149	AQ5	V	314	317	Right-handed 310
Helix 150	AQ6	V	318	339	Right-handed alpha
Helix 151	AQ7	V	344	364	Right-handed alpha
Helix 152	AQ8	V	364	377	Right-handed alpha
Helix 153	AQ9	W	68	72	Right-handed 310
Helix 154	AR1	W	78	84	Right-handed alpha
Helix 155	AR2	W	85	89	Right-handed 310
Helix 156	AR3	W	95	107	Right-handed alpha
Helix 157	AR4	W	129	142	Right-handed alpha
Helix 158	AR5	W	147	155	Right-handed alpha
Helix 159	AR6	W	156	166	Right-handed alpha
Helix 160	AR7	W	168	182	Right-handed alpha
Helix 161	AR8	W	184	188	Right-handed 310
Helix 162	AR9	W	193	197	Right-handed 310
Helix 163	AS1	W	201	213	Right-handed alpha
Helix 164	AS2	W	226	239	Right-handed alpha
Helix 165	AS3	W	280	293	Right-handed alpha
Helix 166	AS4	W	307	317	Right-handed alpha
Helix 167	AS5	W	346	363	Right-handed alpha
Helix 168	AS6	W	367	388	Right-handed alpha
Helix 169	AS7	W	388	403	Right-handed alpha
Helix 170	AS8	W	408	418	Right-handed alpha
Helix 171	AS9	W	420	434	Right-handed alpha
Helix 172	AT1	Y	37	42	Right-handed alpha
Helix 173	AT2	Y	78	82	Right-handed 310
Helix 174	AT3	Y	83	87	Right-handed 310
Helix 175	AT4	Y	88	97	Right-handed alpha
Helix 176	AT5	Y	105	116	Right-handed alpha
Helix 177	AT6	Y	139	153	Right-handed alpha
Helix 178	AT7	Y	157	177	Right-handed alpha
Helix 179	AT8	Y	179	193	Right-handed alpha
Helix 180	AT9	Y	195	199	Right-handed 310
Helix 181	AU1	Y	206	211	Right-handed 310
Helix 182	AU2	Y	212	224	Right-handed alpha
Helix 183	AU3	Y	238	248	Right-handed alpha
Helix 184	AU4	Y	249	253	Right-handed 310
Helix 185	AU5	Y	257	261	Right-handed 310
Helix 186	AU6	Y	299	312	Right-handed alpha
Helix 187	AU7	Y	326	333	Right-handed alpha
Helix 188	AU8	Y	364	381	Right-handed alpha
Helix 189	AU9	Y	384	402	Right-handed alpha
Helix 190	AV1	Y	405	421	Right-handed alpha
Helix 191	AV2	Y	425	434	Right-handed alpha
Helix 192	AV3	Y	437	449	Right-handed alpha
Helix 193	AV4	Y	467	474	Right-handed alpha

There are 20 sheets in PDB entry 5XTE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	18	first strand
Strand 2	L	274	275	anti-parallel
Strand 3	L	455	459	parallel
Strand 4	L	285	294	anti-parallel
Strand 5	L	351	360	anti-parallel
Strand 6	L	340	347	anti-parallel
Strand 7	L	314	315	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	16	first strand
Strand 2	K	109	114	anti-parallel
Strand 3	K	119	126	anti-parallel
Strand 4	K	58	65	anti-parallel
Strand 5	K	218	222	anti-parallel
Strand 6	K	48	51	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	169	first strand
Strand 2	C	172	178	anti-parallel
Strand 3	C	210	214	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	235	first strand
Strand 2	C	242	244	anti-parallel
Strand 3	C	249	251	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	263	265	first strand
Strand 2	C	271	273	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	154	155	first strand
Strand 2	H	166	167	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	22	24	first strand
Strand 2	J	217	219	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	257	259	first strand
Strand 2	K	437	440	parallel
Strand 3	K	266	275	anti-parallel
Strand 4	K	334	343	anti-parallel
Strand 5	K	321	328	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	68	69	first strand
Strand 2	L	135	136	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	121	124	first strand
Strand 2	L	129	132	anti-parallel
Strand 3	L	72	73	anti-parallel
Strand 4	L	231	232	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	16	18	first strand
Strand 2	Y	274	276	anti-parallel
Strand 3	Y	455	459	parallel
Strand 4	Y	285	292	anti-parallel
Strand 5	Y	353	360	anti-parallel
Strand 6	Y	340	345	anti-parallel
Strand 7	Y	314	315	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	166	169	first strand
Strand 2	P	172	178	anti-parallel
Strand 3	P	210	214	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	225	226	first strand
Strand 2	P	234	236	anti-parallel
Strand 3	P	241	243	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	263	265	first strand
Strand 2	P	271	273	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	154	155	first strand
Strand 2	U	166	167	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	V	22	24	first strand
Strand 2	V	217	219	anti-parallel

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There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	41	42	first strand
Strand 2	W	48	50	anti-parallel
Strand 3	W	219	221	parallel
Strand 4	W	58	65	anti-parallel
Strand 5	W	119	126	anti-parallel
Strand 6	W	109	114	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	257	259	first strand
Strand 2	W	436	441	parallel
Strand 3	W	266	275	anti-parallel
Strand 4	W	334	343	anti-parallel
Strand 5	W	321	329	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	51	52	first strand
Strand 2	Y	58	63	anti-parallel
Strand 3	Y	230	235	parallel
Strand 4	Y	72	73	anti-parallel
Strand 5	Y	130	132	anti-parallel
Strand 6	Y	121	123	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Y	68	69	first strand
Strand 2	Y	135	136	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5XTE

Analysis of interatomic Contacts of Structural Units in PDB entry:
5XTE