Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZHU entry

There are 3 chains in PDB entry 5ZHU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 340	ALA 522
B	GLN 340	ALA 522
C	GLN 340	ALA 522

There are 3 helices in PDB entry 5ZHU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	348	352	Right-handed 310
Helix 2	AA2	B	348	352	Right-handed 310
Helix 3	AA3	C	348	352	Right-handed 310

There are 15 sheets in PDB entry 5ZHU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	346	first strand
Strand 2	A	507	515	anti-parallel
Strand 3	A	493	502	anti-parallel
Strand 4	A	419	428	anti-parallel
Strand 5	A	431	436	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	346	first strand
Strand 2	A	507	515	anti-parallel
Strand 3	A	493	502	anti-parallel
Strand 4	A	419	428	anti-parallel
Strand 5	A	453	455	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	356	first strand
Strand 2	A	407	410	anti-parallel
Strand 3	A	413	416	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	374	first strand
Strand 2	A	393	401	anti-parallel
Strand 3	A	461	472	anti-parallel
Strand 4	A	438	441	anti-parallel
Strand 5	A	447	449	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	377	379	first strand
Strand 2	A	384	388	anti-parallel
Strand 3	A	518	521	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	346	first strand
Strand 2	B	506	515	anti-parallel
Strand 3	B	493	503	anti-parallel
Strand 4	B	419	428	anti-parallel
Strand 5	B	431	436	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	344	346	first strand
Strand 2	B	506	515	anti-parallel
Strand 3	B	493	503	anti-parallel
Strand 4	B	419	428	anti-parallel
Strand 5	B	453	455	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	356	first strand
Strand 2	B	407	410	anti-parallel
Strand 3	B	413	416	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	367	374	first strand
Strand 2	B	393	401	anti-parallel
Strand 3	B	461	472	anti-parallel
Strand 4	B	438	441	anti-parallel
Strand 5	B	447	449	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	379	first strand
Strand 2	B	384	388	anti-parallel
Strand 3	B	518	521	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	346	first strand
Strand 2	C	507	515	anti-parallel
Strand 3	C	493	502	anti-parallel
Strand 4	C	419	428	anti-parallel
Strand 5	C	435	436	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	344	346	first strand
Strand 2	C	507	515	anti-parallel
Strand 3	C	493	502	anti-parallel
Strand 4	C	419	428	anti-parallel
Strand 5	C	453	455	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	356	first strand
Strand 2	C	407	410	anti-parallel
Strand 3	C	413	416	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	367	374	first strand
Strand 2	C	393	401	anti-parallel
Strand 3	C	461	472	anti-parallel
Strand 4	C	438	440	anti-parallel
Strand 5	C	448	449	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	377	379	first strand
Strand 2	C	384	388	anti-parallel
Strand 3	C	518	521	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZHU

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZHU