Analysis of interatomic Contacts of Structural Units in PDB entry:
6A0H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A0H entry

There are 4 chains in PDB entry 6A0H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ILE 305
B
 PRO 2ILE 305
C
 ASN 1ALA 4
D
 ASN 1ALA 3
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6A0H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 22Right-handed alpha
Helix 2
AA2
A
23 36Right-handed alpha
Helix 3
AA3
A
97 111Right-handed alpha
Helix 4
AA4
A
134 149Right-handed alpha
Helix 5
AA5
A
200 210Right-handed alpha
Helix 6
AA6
A
237 242Right-handed alpha
Helix 7
AA7
A
245 254Right-handed alpha
Helix 8
AA8
A
263 278Right-handed alpha
Helix 9
AA9
A
286 290Right-handed 310
Helix 10
AB1
B
15 22Right-handed alpha
Helix 11
AB2
B
23 35Right-handed alpha
Helix 12
AB3
B
97 110Right-handed alpha
Helix 13
AB4
B
134 149Right-handed alpha
Helix 14
AB5
B
200 210Right-handed alpha
Helix 15
AB6
B
237 243Right-handed alpha
Helix 16
AB7
B
245 253Right-handed alpha
Helix 17
AB8
B
264 278Right-handed alpha
Helix 18
AB9
B
280 285Right-handed alpha
Helix 19
AC1
B
286 290Right-handed 310
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There are 8 sheets in PDB entry 6A0H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 9first strand
Strand 2
A
3 5anti-parallel
Strand 3
A
154 161parallel
Strand 4
A
121 127parallel
Strand 5
A
76 82anti-parallel
Strand 6
A
88 93anti-parallel
Strand 7
A
53 57anti-parallel
Strand 8
A
215 216parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
188 194parallel
Strand 3
A
180 183anti-parallel
Strand 4
A
66 69anti-parallel
Strand 5
A
46 48parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 169first strand
Strand 2
A
172 175anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
224 227anti-parallel
Strand 3
A
292 296anti-parallel
Strand 4
A
302 304anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 9first strand
Strand 2
B
3 5anti-parallel
Strand 3
B
154 161parallel
Strand 4
B
121 127parallel
Strand 5
B
76 82anti-parallel
Strand 6
B
88 93anti-parallel
Strand 7
B
53 57anti-parallel
Strand 8
B
215 216parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
39 41first strand
Strand 2
B
189 194parallel
Strand 3
B
180 183anti-parallel
Strand 4
B
66 69anti-parallel
Strand 5
B
46 48parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 169first strand
Strand 2
B
172 175anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 219first strand
Strand 2
B
224 227anti-parallel
Strand 3
B
292 296anti-parallel
Strand 4
B
302 304anti-parallel
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