Analysis of interatomic Contacts of Structural Units in PDB entry:
6A37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6A37 entry

There is 1 chain in PDB entry 6A37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 6GLN 532
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6A37. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
15 28Right-handed alpha
Helix 2
AA2
A
44 49Right-handed alpha
Helix 3
AA3
A
68 75Right-handed alpha
Helix 4
AA4
A
83 98Right-handed alpha
Helix 5
AA5
A
100 102Right-handed 310
Helix 6
AA6
A
154 158Right-handed 310
Helix 7
AA7
A
166 168Right-handed 310
Helix 8
AA8
A
185 196Right-handed alpha
Helix 9
AA9
A
221 231Right-handed alpha
Helix 10
AB1
A
231 241Right-handed alpha
Helix 11
AB2
A
254 258Right-handed 310
Helix 12
AB3
A
259 274Right-handed alpha
Helix 13
AB4
A
275 282Right-handed alpha
Helix 14
AB5
A
290 309Right-handed alpha
Helix 15
AB6
A
311 319Right-handed alpha
Helix 16
AB7
A
333 338Right-handed alpha
Helix 17
AB8
A
384 389Right-handed alpha
Helix 18
AB9
A
394 398Right-handed 310
Helix 19
AC1
A
399 404Right-handed alpha
Helix 20
AC2
A
434 456Right-handed alpha
Helix 21
AC3
A
464 480Right-handed alpha
Helix 22
AC4
A
509 522Right-handed alpha
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There are 6 sheets in PDB entry 6A37. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
104 105first strand
Strand 2
A
33 36parallel
Strand 3
A
7 12parallel
Strand 4
A
131 139parallel
Strand 5
A
121 126anti-parallel
Strand 6
A
110 116anti-parallel
Strand 7
A
391 393parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
104 105first strand
Strand 2
A
33 36parallel
Strand 3
A
7 12parallel
Strand 4
A
131 139parallel
Strand 5
A
422 424parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
161 164first strand
Strand 2
A
373 376parallel
Strand 3
A
178 182parallel
Strand 4
A
201 206parallel
Strand 5
A
343 347parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
212 214first strand
Strand 2
A
329 331parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
353 357first strand
Strand 2
A
360 363anti-parallel
Strand 3
A
368 370anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
460 463first strand
Strand 2
A
528 531anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il