Analysis of interatomic Contacts of Structural Units in PDB entry:
6B0Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6B0Z entry

There are 4 chains in PDB entry 6B0Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 3ALA 412
C
LYS 3LEU 414
B
LYS 3LYS 413
D
LYS 3GLN 411
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 6B0Z. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
16 30Right-handed alpha
Helix 2
AA2
A
45 52Right-handed alpha
Helix 3
AA3
A
54 68Right-handed alpha
Helix 4
AA4
A
79 87Right-handed alpha
Helix 5
AA5
A
94 104Right-handed alpha
Helix 6
AA6
A
186 204Right-handed alpha
Helix 7
AA7
A
218 235Right-handed alpha
Helix 8
AA8
A
235 242Right-handed alpha
Helix 9
AA9
A
251 260Right-handed alpha
Helix 10
AB1
A
278 286Right-handed alpha
Helix 11
AB2
A
287 289Right-handed 310
Helix 12
AB3
A
312 321Right-handed alpha
Helix 13
AB4
A
329 348Right-handed alpha
Helix 14
AB5
A
349 369Right-handed alpha
Helix 15
AB6
A
373 382Right-handed alpha
Helix 16
AB7
A
383 386Right-handed 310
Helix 17
AB8
A
387 391Right-handed 310
Helix 18
AB9
A
393 411Right-handed alpha
Helix 19
AC1
C
16 30Right-handed alpha
Helix 20
AC2
C
45 52Right-handed alpha
Helix 21
AC3
C
54 68Right-handed alpha
Helix 22
AC4
C
79 87Right-handed alpha
Helix 23
AC5
C
94 104Right-handed alpha
Helix 24
AC6
C
186 204Right-handed alpha
Helix 25
AC7
C
218 235Right-handed alpha
Helix 26
AC8
C
235 242Right-handed alpha
Helix 27
AC9
C
251 261Right-handed alpha
Helix 28
AD1
C
273 278Right-handed alpha
Helix 29
AD2
C
278 286Right-handed alpha
Helix 30
AD3
C
287 289Right-handed 310
Helix 31
AD4
C
312 321Right-handed alpha
Helix 32
AD5
C
329 348Right-handed alpha
Helix 33
AD6
C
349 369Right-handed alpha
Helix 34
AD7
C
373 382Right-handed alpha
Helix 35
AD8
C
387 391Right-handed 310
Helix 36
AD9
C
393 412Right-handed alpha
Helix 37
AE1
B
16 30Right-handed alpha
Helix 38
AE2
B
45 52Right-handed alpha
Helix 39
AE3
B
54 68Right-handed alpha
Helix 40
AE4
B
79 87Right-handed alpha
Helix 41
AE5
B
94 104Right-handed alpha
Helix 42
AE6
B
137 141Right-handed 310
Helix 43
AE7
B
186 204Right-handed alpha
Helix 44
AE8
B
218 235Right-handed alpha
Helix 45
AE9
B
235 242Right-handed alpha
Helix 46
AF1
B
251 261Right-handed alpha
Helix 47
AF2
B
273 278Right-handed alpha
Helix 48
AF3
B
278 286Right-handed alpha
Helix 49
AF4
B
287 289Right-handed 310
Helix 50
AF5
B
312 321Right-handed alpha
Helix 51
AF6
B
329 348Right-handed alpha
Helix 52
AF7
B
349 369Right-handed alpha
Helix 53
AF8
B
373 382Right-handed alpha
Helix 54
AF9
B
383 386Right-handed 310
Helix 55
AG1
B
387 391Right-handed 310
Helix 56
AG2
B
393 412Right-handed alpha
Helix 57
AG3
D
16 30Right-handed alpha
Helix 58
AG4
D
45 50Right-handed alpha
Helix 59
AG5
D
54 68Right-handed alpha
Helix 60
AG6
D
79 87Right-handed alpha
Helix 61
AG7
D
94 104Right-handed alpha
Helix 62
AG8
D
186 204Right-handed alpha
Helix 63
AG9
D
218 235Right-handed alpha
Helix 64
AH1
D
235 242Right-handed alpha
Helix 65
AH2
D
251 260Right-handed alpha
Helix 66
AH3
D
278 286Right-handed alpha
Helix 67
AH4
D
287 289Right-handed 310
Helix 68
AH5
D
312 321Right-handed alpha
Helix 69
AH6
D
329 347Right-handed alpha
Helix 70
AH7
D
349 369Right-handed alpha
Helix 71
AH8
D
373 382Right-handed alpha
Helix 72
AH9
D
383 386Right-handed 310
Helix 73
AI1
D
387 391Right-handed 310
Helix 74
AI2
D
393 411Right-handed alpha
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There are 8 sheets in PDB entry 6B0Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
35 43first strand
Strand 2
A
5 14parallel
Strand 3
A
69 72parallel
Strand 4
A
303 307parallel
Strand 5
A
291 296anti-parallel
Strand 6
A
106 111anti-parallel
Strand 7
A
128 132anti-parallel
Strand 8
A
265 269parallel
Strand 9
A
207 211parallel
Strand 10
A
246 250parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
142 146first strand
Strand 2
A
177 185anti-parallel
Strand 3
C
177 185anti-parallel
Strand 4
C
141 146anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
165 172first strand
Strand 2
A
150 158anti-parallel
Strand 3
C
150 158anti-parallel
Strand 4
C
165 172anti-parallel
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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
35 43first strand
Strand 2
C
5 14parallel
Strand 3
C
69 72parallel
Strand 4
C
303 307parallel
Strand 5
C
291 296anti-parallel
Strand 6
C
106 111anti-parallel
Strand 7
C
129 133anti-parallel
Strand 8
C
266 269parallel
Strand 9
C
207 211parallel
Strand 10
C
246 250parallel
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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
35 43first strand
Strand 2
B
5 14parallel
Strand 3
B
69 72parallel
Strand 4
B
303 307parallel
Strand 5
B
291 296anti-parallel
Strand 6
B
106 111anti-parallel
Strand 7
B
129 133anti-parallel
Strand 8
B
266 269parallel
Strand 9
B
207 211parallel
Strand 10
B
246 250parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
142 146first strand
Strand 2
B
177 185anti-parallel
Strand 3
D
177 185anti-parallel
Strand 4
D
141 146anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
165 172first strand
Strand 2
B
150 158anti-parallel
Strand 3
D
150 158anti-parallel
Strand 4
D
165 172anti-parallel
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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
35 43first strand
Strand 2
D
5 14parallel
Strand 3
D
69 72parallel
Strand 4
D
303 307parallel
Strand 5
D
291 296anti-parallel
Strand 6
D
106 111anti-parallel
Strand 7
D
128 132anti-parallel
Strand 8
D
265 269parallel
Strand 9
D
207 211parallel
Strand 10
D
246 250parallel
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