Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5I

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6B5I entry

There are 4 chains in PDB entry 6B5I (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 27	SER 518
B	PRO 27	SER 518
C	PRO 27	SER 518
D	PRO 27	SER 518

There are 74 helices in PDB entry 6B5I. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	87	Right-handed alpha
Helix 2	AA2	A	92	97	Right-handed alpha
Helix 3	AA3	A	98	116	Right-handed alpha
Helix 4	AA4	A	116	129	Right-handed alpha
Helix 5	AA5	A	131	138	Right-handed alpha
Helix 6	AA6	A	138	154	Right-handed alpha
Helix 7	AA7	A	155	157	Right-handed 310
Helix 8	AA8	A	188	203	Right-handed alpha
Helix 9	AA9	A	216	230	Right-handed alpha
Helix 10	AB1	A	245	252	Right-handed alpha
Helix 11	AB2	A	264	278	Right-handed alpha
Helix 12	AB3	A	300	314	Right-handed alpha
Helix 13	AB4	A	315	318	Right-handed 310
Helix 14	AB5	A	332	347	Right-handed alpha
Helix 15	AB6	A	364	380	Right-handed alpha
Helix 16	AB7	A	430	440	Right-handed alpha
Helix 17	AB8	A	453	464	Right-handed alpha
Helix 18	AB9	A	496	502	Right-handed 310
Helix 19	AC1	B	73	87	Right-handed alpha
Helix 20	AC2	B	92	97	Right-handed alpha
Helix 21	AC3	B	98	116	Right-handed alpha
Helix 22	AC4	B	116	129	Right-handed alpha
Helix 23	AC5	B	131	138	Right-handed alpha
Helix 24	AC6	B	138	154	Right-handed alpha
Helix 25	AC7	B	155	157	Right-handed 310
Helix 26	AC8	B	188	203	Right-handed alpha
Helix 27	AC9	B	216	230	Right-handed alpha
Helix 28	AD1	B	245	252	Right-handed alpha
Helix 29	AD2	B	264	278	Right-handed alpha
Helix 30	AD3	B	300	314	Right-handed alpha
Helix 31	AD4	B	315	318	Right-handed 310
Helix 32	AD5	B	332	345	Right-handed alpha
Helix 33	AD6	B	364	380	Right-handed alpha
Helix 34	AD7	B	412	416	Right-handed 310
Helix 35	AD8	B	430	440	Right-handed alpha
Helix 36	AD9	B	453	464	Right-handed alpha
Helix 37	AE1	B	497	502	Right-handed alpha
Helix 38	AE2	C	73	88	Right-handed alpha
Helix 39	AE3	C	92	97	Right-handed alpha
Helix 40	AE4	C	98	116	Right-handed alpha
Helix 41	AE5	C	116	129	Right-handed alpha
Helix 42	AE6	C	131	138	Right-handed alpha
Helix 43	AE7	C	138	154	Right-handed alpha
Helix 44	AE8	C	190	204	Right-handed alpha
Helix 45	AE9	C	216	230	Right-handed alpha
Helix 46	AF1	C	246	252	Right-handed alpha
Helix 47	AF2	C	264	278	Right-handed alpha
Helix 48	AF3	C	300	314	Right-handed alpha
Helix 49	AF4	C	315	318	Right-handed 310
Helix 50	AF5	C	332	347	Right-handed alpha
Helix 51	AF6	C	364	381	Right-handed alpha
Helix 52	AF7	C	430	440	Right-handed alpha
Helix 53	AF8	C	453	464	Right-handed alpha
Helix 54	AF9	C	486	488	Right-handed 310
Helix 55	AG1	C	499	502	Right-handed 310
Helix 56	AG2	D	73	88	Right-handed alpha
Helix 57	AG3	D	92	97	Right-handed alpha
Helix 58	AG4	D	98	116	Right-handed alpha
Helix 59	AG5	D	116	129	Right-handed alpha
Helix 60	AG6	D	131	138	Right-handed alpha
Helix 61	AG7	D	138	154	Right-handed alpha
Helix 62	AG8	D	155	157	Right-handed 310
Helix 63	AG9	D	188	203	Right-handed alpha
Helix 64	AH1	D	216	230	Right-handed alpha
Helix 65	AH2	D	245	252	Right-handed alpha
Helix 66	AH3	D	264	278	Right-handed alpha
Helix 67	AH4	D	300	314	Right-handed alpha
Helix 68	AH5	D	315	318	Right-handed 310
Helix 69	AH6	D	332	346	Right-handed alpha
Helix 70	AH7	D	364	381	Right-handed alpha
Helix 71	AH8	D	411	416	Right-handed alpha
Helix 72	AH9	D	430	440	Right-handed alpha
Helix 73	AI1	D	453	463	Right-handed alpha
Helix 74	AI2	D	499	502	Right-handed 310

There are 19 sheets in PDB entry 6B5I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	42	first strand
Strand 2	A	45	47	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	58	first strand
Strand 2	A	65	70	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	162	first strand
Strand 2	A	168	176	anti-parallel
Strand 3	A	504	512	anti-parallel
Strand 4	C	468	471	parallel
Strand 5	C	446	450	parallel
Strand 6	C	292	295	parallel
Strand 7	C	325	329	parallel
Strand 8	C	422	428	parallel
Strand 9	C	402	405	parallel
Strand 10	C	384	387	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	238	first strand
Strand 2	A	206	210	parallel
Strand 3	A	179	183	parallel
Strand 4	A	258	262	parallel
Strand 5	A	282	286	parallel
Strand 6	A	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	384	387	first strand
Strand 2	A	402	405	anti-parallel
Strand 3	A	422	428	parallel
Strand 4	A	325	329	parallel
Strand 5	A	292	295	parallel
Strand 6	A	446	450	parallel
Strand 7	A	468	471	parallel
Strand 8	C	504	512	parallel
Strand 9	C	168	176	anti-parallel
Strand 10	C	161	162	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	391	392	first strand
Strand 2	A	398	399	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	443	444	first strand
Strand 2	A	486	487	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	41	first strand
Strand 2	B	46	47	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	54	58	first strand
Strand 2	B	65	70	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	162	first strand
Strand 2	B	168	176	anti-parallel
Strand 3	B	504	512	anti-parallel
Strand 4	D	468	471	parallel
Strand 5	D	446	450	parallel
Strand 6	D	292	295	parallel
Strand 7	D	325	329	parallel
Strand 8	D	422	428	parallel
Strand 9	D	402	403	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	236	238	first strand
Strand 2	B	206	210	parallel
Strand 3	B	179	183	parallel
Strand 4	B	258	260	parallel
Strand 5	B	282	284	parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	384	387	first strand
Strand 2	B	402	405	anti-parallel
Strand 3	B	422	425	parallel
Strand 4	B	325	328	parallel
Strand 5	B	293	295	parallel
Strand 6	B	446	450	parallel
Strand 7	B	468	471	parallel
Strand 8	D	504	512	parallel
Strand 9	D	168	176	anti-parallel
Strand 10	D	161	162	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	483	484	first strand
Strand 2	B	493	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	42	first strand
Strand 2	C	45	47	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	58	first strand
Strand 2	C	65	70	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	238	first strand
Strand 2	C	206	210	parallel
Strand 3	C	179	183	parallel
Strand 4	C	258	262	parallel
Strand 5	C	282	286	parallel
Strand 6	C	490	491	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	40	42	first strand
Strand 2	D	45	47	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	54	58	first strand
Strand 2	D	65	70	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	238	first strand
Strand 2	D	206	210	parallel
Strand 3	D	179	183	parallel
Strand 4	D	258	262	parallel
Strand 5	D	282	286	parallel
Strand 6	D	490	491	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6B5I

Analysis of interatomic Contacts of Structural Units in PDB entry:
6B5I