Analysis of interatomic Contacts of Structural Units in PDB entry:
6BHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BHE entry

There are 4 chains in PDB entry 6BHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 190ALA 406
B
 ALA 7ARG 8
B
 SER 10GLY 13
B
 ALA 15LYS 18
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 6BHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
254 258Right-handed 310
Helix 2
AA2
A
286 290Right-handed 310
Helix 3
AA3
A
319 324Right-handed 310
Helix 4
AA4
A
326 340Right-handed alpha
Helix 5
AA5
A
395 404Right-handed alpha
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There are 5 sheets in PDB entry 6BHE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
213 224anti-parallel
Strand 3
A
227 234anti-parallel
Strand 4
A
239 243anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
213 224anti-parallel
Strand 3
A
203 207anti-parallel
Strand 4
A
247 249anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 195first strand
Strand 2
A
198 199anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 305first strand
Strand 2
A
293 297anti-parallel
Strand 3
A
274 283anti-parallel
Strand 4
A
263 269anti-parallel
Strand 5
A
310 312anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
353 358first strand
Strand 2
A
361 371anti-parallel
Strand 3
A
374 379anti-parallel
Strand 4
A
385 389anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il