Analysis of interatomic Contacts of Structural Units in PDB entry:
6BSJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BSJ entry

There are 5 chains in PDB entry 6BSJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4ARG 557
B
 THR 7PRO 433
D
 G 2 C 24
R
 G 3 A 4
R
 G 6 A 27
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6BSJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
27 44Right-handed alpha
Helix 2
AA2
A
77 84Right-handed alpha
Helix 3
AA3
A
96 100Right-handed 310
Helix 4
AA4
A
114 118Right-handed 310
Helix 5
AA5
A
121 129Right-handed 310
Helix 6
AA6
A
155 175Right-handed alpha
Helix 7
AA7
A
194 212Right-handed alpha
Helix 8
AA8
A
218 222Right-handed 310
Helix 9
AA9
A
253 268Right-handed alpha
Helix 10
AB1
A
276 281Right-handed alpha
Helix 11
AB2
A
282 284Right-handed 310
Helix 12
AB3
A
296 310Right-handed alpha
Helix 13
AB4
A
363 384Right-handed alpha
Helix 14
AB5
A
394 405Right-handed alpha
Helix 15
AB6
A
473 488Right-handed alpha
Helix 16
AB7
A
499 508Right-handed alpha
Helix 17
AB8
A
515 528Right-handed alpha
Helix 18
AB9
A
544 553Right-handed alpha
Helix 19
AC1
B
27 44Right-handed alpha
Helix 20
AC2
B
77 84Right-handed alpha
Helix 21
AC3
B
84 90Right-handed alpha
Helix 22
AC4
B
97 103Right-handed 310
Helix 23
AC5
B
112 115Right-handed 310
Helix 24
AC6
B
121 129Right-handed 310
Helix 25
AC7
B
134 138Right-handed 310
Helix 26
AC8
B
154 160Right-handed alpha
Helix 27
AC9
B
160 175Right-handed alpha
Helix 28
AD1
B
194 212Right-handed alpha
Helix 29
AD2
B
235 239Right-handed 310
Helix 30
AD3
B
253 268Right-handed alpha
Helix 31
AD4
B
276 281Right-handed alpha
Helix 32
AD5
B
296 311Right-handed alpha
Helix 33
AD6
B
363 384Right-handed alpha
Helix 34
AD7
B
394 406Right-handed alpha
Helix 35
AD8
B
420 429Right-handed alpha
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There are 9 sheets in PDB entry 6BSJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 49first strand
Strand 2
A
142 146anti-parallel
Strand 3
A
130 132anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 110first strand
Strand 2
A
186 191anti-parallel
Strand 3
A
179 183anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 229first strand
Strand 2
A
232 234anti-parallel
Strand 3
A
239 241anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
347 355first strand
Strand 2
A
336 344anti-parallel
Strand 3
A
326 331anti-parallel
Strand 4
A
388 391parallel
Strand 5
A
414 416parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 470first strand
Strand 2
A
452 459anti-parallel
Strand 3
A
438 446anti-parallel
Strand 4
A
492 497parallel
Strand 5
A
530 535parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 49first strand
Strand 2
B
142 146anti-parallel
Strand 3
B
130 132anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 63first strand
Strand 2
B
72 75anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 110first strand
Strand 2
B
186 191anti-parallel
Strand 3
B
179 183anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 355first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
326 333anti-parallel
Strand 4
B
388 391parallel
Strand 5
B
414 416parallel
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