Analysis of interatomic Contacts of Structural Units in PDB entry:
6BW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BW4 entry

There are 4 chains in PDB entry 6BW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
ASP 9ASN 410
B
MET 1LEU 10
A
LYS 4ASN 410
D
MET 1LEU 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6BW4. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
9 31Right-handed alpha
Helix 2
AA2
C
155 157Right-handed 310
Helix 3
AA3
C
348 350Right-handed 310
Helix 4
AA4
C
405 410Right-handed alpha
Helix 5
AA5
A
6 31Right-handed alpha
Helix 6
AA6
A
155 157Right-handed 310
Helix 7
AA7
A
348 350Right-handed 310
Helix 8
AA8
A
405 410Right-handed alpha
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There are 14 sheets in PDB entry 6BW4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
32 39first strand
Strand 2
C
398 404anti-parallel
Strand 3
C
389 394anti-parallel
Strand 4
C
377 382anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
48 54first strand
Strand 2
C
61 69anti-parallel
Strand 3
C
77 87anti-parallel
Strand 4
C
115 123anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
129 133first strand
Strand 2
C
136 143anti-parallel
Strand 3
C
149 153anti-parallel
Strand 4
C
171 174anti-parallel
Strand 5
C
215 218parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
183 185first strand
Strand 2
C
192 196anti-parallel
Strand 3
C
202 206anti-parallel
Strand 4
C
221 223anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
230 235first strand
Strand 2
C
242 247anti-parallel
Strand 3
C
251 256anti-parallel
Strand 4
C
267 270anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
276 281first strand
Strand 2
C
288 293anti-parallel
Strand 3
C
297 302anti-parallel
Strand 4
C
311 314anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
320 325first strand
Strand 2
C
332 337anti-parallel
Strand 3
C
342 346anti-parallel
Strand 4
C
366 370anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
32 39first strand
Strand 2
A
398 404anti-parallel
Strand 3
A
389 394anti-parallel
Strand 4
A
377 382anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
48 49first strand
Strand 2
A
61 69anti-parallel
Strand 3
A
77 87anti-parallel
Strand 4
A
115 123anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 133first strand
Strand 2
A
136 143anti-parallel
Strand 3
A
149 153anti-parallel
Strand 4
A
171 174anti-parallel
Strand 5
A
215 218parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
183 185first strand
Strand 2
A
192 196anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
221 223anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
230 235first strand
Strand 2
A
242 247anti-parallel
Strand 3
A
251 256anti-parallel
Strand 4
A
267 270anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
276 281first strand
Strand 2
A
288 293anti-parallel
Strand 3
A
297 302anti-parallel
Strand 4
A
311 314anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
320 325first strand
Strand 2
A
332 337anti-parallel
Strand 3
A
342 346anti-parallel
Strand 4
A
366 370anti-parallel
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