Analysis of interatomic Contacts of Structural Units in PDB entry:
6BW5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6BW5 entry

There are 4 chains in PDB entry 6BW5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 8	LEU 404
B	MET 9	GLN 400
C	PRO 8	LEU 401
D	MET 9	GLN 400

There are 58 helices in PDB entry 6BW5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	32	Right-handed alpha
Helix 2	AA2	A	32	39	Right-handed alpha
Helix 3	AA3	A	58	74	Right-handed alpha
Helix 4	AA4	A	91	119	Right-handed alpha
Helix 5	AA5	A	121	144	Right-handed alpha
Helix 6	AA6	A	166	187	Right-handed alpha
Helix 7	AA7	A	192	214	Right-handed alpha
Helix 8	AA8	A	218	243	Right-handed alpha
Helix 9	AA9	A	250	270	Right-handed alpha
Helix 10	AB1	A	271	279	Right-handed alpha
Helix 11	AB2	A	279	294	Right-handed alpha
Helix 12	AB3	A	327	340	Right-handed alpha
Helix 13	AB4	A	362	372	Right-handed alpha
Helix 14	AB5	A	375	400	Right-handed alpha
Helix 15	AB6	B	10	32	Right-handed alpha
Helix 16	AB7	B	32	39	Right-handed alpha
Helix 17	AB8	B	58	74	Right-handed alpha
Helix 18	AB9	B	91	119	Right-handed alpha
Helix 19	AC1	B	121	144	Right-handed alpha
Helix 20	AC2	B	166	187	Right-handed alpha
Helix 21	AC3	B	192	214	Right-handed alpha
Helix 22	AC4	B	218	243	Right-handed alpha
Helix 23	AC5	B	250	270	Right-handed alpha
Helix 24	AC6	B	271	279	Right-handed alpha
Helix 25	AC7	B	279	289	Right-handed alpha
Helix 26	AC8	B	289	294	Right-handed alpha
Helix 27	AC9	B	329	341	Right-handed alpha
Helix 28	AD1	B	362	372	Right-handed alpha
Helix 29	AD2	B	375	400	Right-handed alpha
Helix 30	AD3	C	9	32	Right-handed alpha
Helix 31	AD4	C	32	39	Right-handed alpha
Helix 32	AD5	C	58	74	Right-handed alpha
Helix 33	AD6	C	91	119	Right-handed alpha
Helix 34	AD7	C	121	144	Right-handed alpha
Helix 35	AD8	C	166	187	Right-handed alpha
Helix 36	AD9	C	192	214	Right-handed alpha
Helix 37	AE1	C	218	243	Right-handed alpha
Helix 38	AE2	C	250	270	Right-handed alpha
Helix 39	AE3	C	271	279	Right-handed alpha
Helix 40	AE4	C	279	289	Right-handed alpha
Helix 41	AE5	C	289	294	Right-handed alpha
Helix 42	AE6	C	327	340	Right-handed alpha
Helix 43	AE7	C	362	372	Right-handed alpha
Helix 44	AE8	C	375	400	Right-handed alpha
Helix 45	AE9	D	10	32	Right-handed alpha
Helix 46	AF1	D	32	39	Right-handed alpha
Helix 47	AF2	D	58	74	Right-handed alpha
Helix 48	AF3	D	91	119	Right-handed alpha
Helix 49	AF4	D	121	144	Right-handed alpha
Helix 50	AF5	D	166	187	Right-handed alpha
Helix 51	AF6	D	192	215	Right-handed alpha
Helix 52	AF7	D	218	243	Right-handed alpha
Helix 53	AF8	D	250	270	Right-handed alpha
Helix 54	AF9	D	271	279	Right-handed alpha
Helix 55	AG1	D	279	294	Right-handed alpha
Helix 56	AG2	D	327	340	Right-handed alpha
Helix 57	AG3	D	362	372	Right-handed alpha
Helix 58	AG4	D	375	400	Right-handed alpha

There are 12 sheets in PDB entry 6BW5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	44	first strand
Strand 2	A	53	55	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	318	319	first strand
Strand 2	A	354	359	anti-parallel
Strand 3	A	345	349	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	42	44	first strand
Strand 2	B	53	55	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	148	149	first strand
Strand 2	B	163	164	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	307	308	first strand
Strand 2	B	313	314	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	318	322	first strand
Strand 2	B	355	359	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	44	first strand
Strand 2	C	53	55	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	308	first strand
Strand 2	C	313	315	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	318	322	first strand
Strand 2	C	354	359	anti-parallel
Strand 3	C	345	349	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	42	44	first strand
Strand 2	D	53	55	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	306	307	first strand
Strand 2	D	314	315	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	318	321	first strand
Strand 2	D	356	359	anti-parallel
Strand 3	D	345	346	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6BW5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6BW5