Analysis of interatomic Contacts of Structural Units in PDB entry:
6BX7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BX7 entry

There is 1 chain in PDB entry 6BX7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
VAL 3ASN 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6BX7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
63 67Right-handed 310
Helix 2
AA2
A
140 143Right-handed 310
Helix 3
AA3
A
153 158Right-handed alpha
Helix 4
AA4
A
252 256Right-handed 310
Helix 5
AA5
A
266 272Right-handed alpha
Helix 6
AA6
A
367 372Right-handed 310
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There are 9 sheets in PDB entry 6BX7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 8first strand
Strand 2
A
93 102parallel
Strand 3
A
75 83anti-parallel
Strand 4
A
33 37anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
16 18first strand
Strand 2
A
50 53anti-parallel
Strand 3
A
42 45anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
115 121first strand
Strand 2
A
204 214parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
145 151anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
129 131first strand
Strand 2
A
172 177anti-parallel
Strand 3
A
160 165anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
222 223first strand
Strand 2
A
247 248anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
227 233first strand
Strand 2
A
311 321parallel
Strand 3
A
295 304anti-parallel
Strand 4
A
258 262anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
241 244first strand
Strand 2
A
281 284anti-parallel
Strand 3
A
273 275anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
329 333first strand
Strand 2
A
356 363anti-parallel
Strand 3
A
396 403anti-parallel
Strand 4
A
383 387anti-parallel
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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
340 341first strand
Strand 2
A
344 346anti-parallel
Strand 3
A
430 438parallel
Strand 4
A
415 422anti-parallel
Strand 5
A
374 377anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il