Analysis of interatomic Contacts of Structural Units in PDB entry:
6BXY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6BXY entry

There is 1 chain in PDB entry 6BXY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2LYS 588
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 6BXY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 8Right-handed 310
Helix 2
AA2
A
15 28Right-handed alpha
Helix 3
AA3
A
33 50Right-handed alpha
Helix 4
AA4
A
82 101Right-handed alpha
Helix 5
AA5
A
102 106Right-handed 310
Helix 6
AA6
A
114 129Right-handed alpha
Helix 7
AA7
A
142 150Right-handed alpha
Helix 8
AA8
A
153 168Right-handed alpha
Helix 9
AA9
A
187 191Right-handed 310
Helix 10
AB1
A
211 217Right-handed alpha
Helix 11
AB2
A
219 226Right-handed 310
Helix 12
AB3
A
231 242Right-handed alpha
Helix 13
AB4
A
253 270Right-handed alpha
Helix 14
AB5
A
276 290Right-handed alpha
Helix 15
AB6
A
297 313Right-handed alpha
Helix 16
AB7
A
318 331Right-handed alpha
Helix 17
AB8
A
333 349Right-handed alpha
Helix 18
AB9
A
354 356Right-handed 310
Helix 19
AC1
A
357 370Right-handed alpha
Helix 20
AC2
A
370 386Right-handed alpha
Helix 21
AC3
A
402 405Right-handed 310
Helix 22
AC4
A
406 426Right-handed alpha
Helix 23
AC5
A
435 446Right-handed alpha
Helix 24
AC6
A
448 453Right-handed alpha
Helix 25
AC7
A
555 560Right-handed alpha
Helix 26
AC8
A
561 567Right-handed 310
Helix 27
AC9
A
571 581Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6BXY. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
192 194first strand
Strand 2
A
182 186anti-parallel
Strand 3
A
174 177anti-parallel
Strand 4
A
228 229anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 457first strand
Strand 2
A
550 551parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il