Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6S entry

There are 9 chains in PDB entry 6C6S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
G 1 C 29
B
G 1 C 29
R
C 11 A 20
G
GLU 7LEU 234
H
SER 4VAL 232
I
VAL 2GLU 1342
J
GLU 16ARG 1373
K
ALA 2THR 84
D
GLN 2LEU 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are106 helices in PDB entry 6C6S. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
G
34 50Right-handed alpha
Helix 2
AA2
G
77 87Right-handed alpha
Helix 3
AA3
G
113 115Right-handed 310
Helix 4
AA4
G
154 159Right-handed alpha
Helix 5
AA5
G
212 230Right-handed alpha
Helix 6
AA6
H
34 50Right-handed alpha
Helix 7
AA7
H
77 87Right-handed alpha
Helix 8
AA8
H
111 115Right-handed 310
Helix 9
AA9
H
212 227Right-handed alpha
Helix 10
AB1
I
28 39Right-handed alpha
Helix 11
AB2
I
42 46Right-handed 310
Helix 12
AB3
I
48 57Right-handed alpha
Helix 13
AB4
I
81 89Right-handed alpha
Helix 14
AB5
I
207 213Right-handed alpha
Helix 15
AB6
I
216 225Right-handed alpha
Helix 16
AB7
I
242 247Right-handed 310
Helix 17
AB8
I
270 281Right-handed alpha
Helix 18
AB9
I
288 292Right-handed 310
Helix 19
AC1
I
318 329Right-handed alpha
Helix 20
AC2
I
345 354Right-handed alpha
Helix 21
AC3
I
358 371Right-handed alpha
Helix 22
AC4
I
377 389Right-handed alpha
Helix 23
AC5
I
398 408Right-handed alpha
Helix 24
AC6
I
421 438Right-handed alpha
Helix 25
AC7
I
455 480Right-handed alpha
Helix 26
AC8
I
495 508Right-handed alpha
Helix 27
AC9
I
519 528Right-handed alpha
Helix 28
AD1
I
551 555Right-handed 310
Helix 29
AD2
I
607 612Right-handed alpha
Helix 30
AD3
I
670 674Right-handed 310
Helix 31
AD4
I
675 687Right-handed alpha
Helix 32
AD5
I
704 712Right-handed alpha
Helix 33
AD6
I
819 825Right-handed alpha
Helix 34
AD7
I
858 863Right-handed alpha
Helix 35
AD8
I
896 906Right-handed alpha
Helix 36
AD9
I
942 979Right-handed alpha
Helix 37
AE1
I
1005 1038Right-handed alpha
Helix 38
AE2
I
1099 1103Right-handed 310
Helix 39
AE3
I
1109 1134Right-handed alpha
Helix 40
AE4
I
1137 1151Right-handed alpha
Helix 41
AE5
I
1160 1164Right-handed 310
Helix 42
AE6
I
1167 1177Right-handed alpha
Helix 43
AE7
I
1191 1202Right-handed alpha
Helix 44
AE8
I
1238 1243Right-handed alpha
Helix 45
AE9
I
1271 1281Right-handed alpha
Helix 46
AF1
I
1283 1292Right-handed alpha
Helix 47
AF2
I
1297 1310Right-handed alpha
Helix 48
AF3
I
1320 1332Right-handed alpha
Helix 49
AF4
J
26 34Right-handed alpha
Helix 50
AF5
J
77 81Right-handed 310
Helix 51
AF6
J
94 100Right-handed 310
Helix 52
AF7
J
113 118Right-handed alpha
Helix 53
AF8
J
131 140Right-handed alpha
Helix 54
AF9
J
161 172Right-handed alpha
Helix 55
AG1
J
180 191Right-handed alpha
Helix 56
AG2
J
193 207Right-handed alpha
Helix 57
AG3
J
210 230Right-handed alpha
Helix 58
AG4
J
233 236Right-handed 310
Helix 59
AG5
J
246 250Right-handed 310
Helix 60
AG6
J
263 286Right-handed alpha
Helix 61
AG7
J
288 308Right-handed alpha
Helix 62
AG8
J
326 332Right-handed alpha
Helix 63
AG9
J
337 342Right-handed alpha
Helix 64
AH1
J
370 377Right-handed alpha
Helix 65
AH2
J
377 389Right-handed alpha
Helix 66
AH3
J
393 404Right-handed alpha
Helix 67
AH4
J
407 417Right-handed alpha
Helix 68
AH5
J
430 432Right-handed 310
Helix 69
AH6
J
450 452Right-handed 310
Helix 70
AH7
J
453 458Right-handed alpha
Helix 71
AH8
J
473 483Right-handed alpha
Helix 72
AH9
J
504 514Right-handed alpha
Helix 73
AI1
J
529 539Right-handed alpha
Helix 74
AI2
J
574 581Right-handed alpha
Helix 75
AI3
J
588 592Right-handed 310
Helix 76
AI4
J
598 613Right-handed alpha
Helix 77
AI5
J
614 636Right-handed alpha
Helix 78
AI6
J
649 671Right-handed alpha
Helix 79
AI7
J
674 703Right-handed alpha
Helix 80
AI8
J
720 728Right-handed alpha
Helix 81
AI9
J
733 742Right-handed alpha
Helix 82
AJ1
J
768 805Right-handed alpha
Helix 83
AJ2
J
834 839Right-handed alpha
Helix 84
AJ3
J
865 876Right-handed alpha
Helix 85
AJ4
J
896 900Right-handed alpha
Helix 86
AJ5
J
914 925Right-handed alpha
Helix 87
AJ6
J
926 928Right-handed 310
Helix 88
AJ7
J
1137 1147Right-handed alpha
Helix 89
AJ8
J
1216 1224Right-handed alpha
Helix 90
AJ9
J
1225 1244Right-handed alpha
Helix 91
AK1
J
1250 1261Right-handed alpha
Helix 92
AK2
J
1282 1294Right-handed alpha
Helix 93
AK3
J
1308 1313Right-handed alpha
Helix 94
AK4
J
1318 1324Right-handed alpha
Helix 95
AK5
J
1327 1338Right-handed alpha
Helix 96
AK6
J
1347 1354Right-handed alpha
Helix 97
AK7
J
1361 1372Right-handed alpha
Helix 98
AK8
K
6 13Right-handed alpha
Helix 99
AK9
K
17 32Right-handed alpha
Helix 100
AL1
K
45 56Right-handed alpha
Helix 101
AL2
K
60 78Right-handed alpha
Helix 102
AL3
K
78 84Right-handed alpha
Helix 103
AL4
D
13 24Right-handed alpha
Helix 104
AL5
D
65 71Right-handed alpha
Helix 105
AL6
D
89 96Right-handed alpha
Helix 106
AL7
D
120 124Right-handed 310
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There are 56 sheets in PDB entry 6C6S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
12 17first strand
Strand 2
G
24 31anti-parallel
Strand 3
G
199 207anti-parallel
Strand 4
G
180 189anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
97 105first strand
Strand 2
G
139 147anti-parallel
Strand 3
G
56 61anti-parallel
Strand 4
G
171 172anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
90 91first strand
Strand 2
G
122 123anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
108 111first strand
Strand 2
G
129 133anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
12 16first strand
Strand 2
H
23 31anti-parallel
Strand 3
H
199 207anti-parallel
Strand 4
H
180 185anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
97 105first strand
Strand 2
H
139 150anti-parallel
Strand 3
H
52 61anti-parallel
Strand 4
H
170 172anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
90 92first strand
Strand 2
H
121 123anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
108 110first strand
Strand 2
H
131 133anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
152 153first strand
Strand 2
H
175 176anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
13 14first strand
Strand 2
I
1182 1183parallel
Strand 3
I
700 701parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
59 60first strand
Strand 2
I
67 75anti-parallel
Strand 3
I
93 104anti-parallel
Strand 4
I
116 128anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
143 145first strand
Strand 2
I
512 514anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
147 148first strand
Strand 2
I
530 531parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
150 151first strand
Strand 2
I
451 452anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
154 158first strand
Strand 2
I
173 177anti-parallel
Strand 3
I
184 187anti-parallel
Strand 4
I
195 197anti-parallel
Strand 5
I
204 205anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
227 231first strand
Strand 2
I
332 336anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
239 240first strand
Strand 2
I
284 285anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
255 257first strand
Strand 2
I
260 263anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
296 297first strand
Strand 2
I
315 316anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
301 303first strand
Strand 2
I
308 311anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
580 581first strand
Strand 2
I
587 593anti-parallel
Strand 3
I
603 606anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
580 581first strand
Strand 2
I
587 593anti-parallel
Strand 3
I
652 654anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
616 617first strand
Strand 2
I
633 637anti-parallel
Strand 3
I
642 646anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
748 752first strand
Strand 2
I
731 736anti-parallel
Strand 3
I
722 727anti-parallel
Strand 4
I
776 777anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
757 758first strand
Strand 2
I
764 765anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
768 769first strand
Strand 2
I
784 785anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
789 790first strand
Strand 2
I
793 794anti-parallel
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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1209 1210first strand
Strand 2
I
1225 1235anti-parallel
Strand 3
I
1065 1067anti-parallel
Strand 4
I
1073 1079anti-parallel
Strand 5
I
816 818parallel
Strand 6
I
1096 1098anti-parallel
Strand 7
I
798 804parallel
Strand 8
I
1225 1235anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
830 832first strand
Strand 2
I
1056 1058anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
835 841first strand
Strand 2
I
1046 1053anti-parallel
Strand 3
I
930 935anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
882 884first strand
Strand 2
I
918 919anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
887 888first strand
Strand 2
I
914 915anti-parallel
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There are 5 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1244 1246first strand
Strand 2
J
350 356anti-parallel
Strand 3
J
465 469anti-parallel
Strand 4
J
421 425anti-parallel
Strand 5
J
434 437anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1244 1246first strand
Strand 2
J
350 356anti-parallel
Strand 3
J
447 448parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1268 1270first strand
Strand 2
J
345 347anti-parallel
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There are 3 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1335 1339first strand
Strand 2
J
20 24anti-parallel
Strand 3
J
1341 1342anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
103 112first strand
Strand 2
J
238 244anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
145 146first strand
Strand 2
J
178 179anti-parallel
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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
253 254first strand
Strand 2
J
260 261anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
366 369first strand
Strand 2
J
439 442parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
547 549first strand
Strand 2
J
571 573anti-parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
552 556first strand
Strand 2
J
564 568anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
706 708first strand
Strand 2
J
713 715anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
809 811first strand
Strand 2
J
894 895parallel
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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
821 822first strand
Strand 2
J
880 881anti-parallel
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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
825 826first strand
Strand 2
J
831 833anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
848 850first strand
Strand 2
J
855 858anti-parallel
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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
957 961first strand
Strand 2
J
980 985anti-parallel
Strand 3
J
991 997anti-parallel
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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
965 967first strand
Strand 2
J
973 975anti-parallel
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There are 3 strands in AF5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1034 1038first strand
Strand 2
J
1077 1081anti-parallel
Strand 3
J
1098 1100anti-parallel
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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1046 1049first strand
Strand 2
J
1058 1061anti-parallel
Strand 3
J
1105 1106anti-parallel
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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1187 1190first strand
Strand 2
J
1173 1178anti-parallel
Strand 3
J
1161 1165anti-parallel
Strand 4
J
1203 1204anti-parallel
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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1279 1281first strand
Strand 2
J
1263 1268anti-parallel
Strand 3
J
1301 1304anti-parallel
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There are 4 strands in AF9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
27 29first strand
Strand 2
D
54 59anti-parallel
Strand 3
D
3 9anti-parallel
Strand 4
D
75 78anti-parallel
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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
32 38first strand
Strand 2
D
43 49anti-parallel
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There are 5 strands in AG2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
150 154first strand
Strand 2
D
139 143anti-parallel
Strand 3
D
128 130anti-parallel
Strand 4
D
115 118anti-parallel
Strand 5
D
159 161anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il