Analysis of interatomic Contacts of Structural Units in PDB entry:
6C6U


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6C6U entry

There are 9 chains in PDB entry 6C6U (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
G 1 C 29
B
G 1 C 29
R
C 11 A 20
G
GLU 7ASP 233
H
VAL 5VAL 232
I
VAL 2ASP 1341
J
GLU 15ARG 1373
K
ARG 3THR 84
N
LYS 6GLN 117
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are101 helices in PDB entry 6C6U. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
G
34 50Right-handed alpha
Helix 2
AA2
G
77 87Right-handed alpha
Helix 3
AA3
G
212 228Right-handed alpha
Helix 4
AA4
G
229 232Right-handed 310
Helix 5
AA5
H
34 50Right-handed alpha
Helix 6
AA6
H
77 87Right-handed alpha
Helix 7
AA7
H
113 115Right-handed 310
Helix 8
AA8
H
212 227Right-handed alpha
Helix 9
AA9
I
4 8Right-handed 310
Helix 10
AB1
I
28 39Right-handed alpha
Helix 11
AB2
I
48 56Right-handed alpha
Helix 12
AB3
I
81 89Right-handed alpha
Helix 13
AB4
I
163 167Right-handed 310
Helix 14
AB5
I
206 213Right-handed alpha
Helix 15
AB6
I
216 225Right-handed alpha
Helix 16
AB7
I
242 247Right-handed 310
Helix 17
AB8
I
270 280Right-handed alpha
Helix 18
AB9
I
318 327Right-handed alpha
Helix 19
AC1
I
345 354Right-handed alpha
Helix 20
AC2
I
358 371Right-handed alpha
Helix 21
AC3
I
377 389Right-handed alpha
Helix 22
AC4
I
398 408Right-handed alpha
Helix 23
AC5
I
421 438Right-handed alpha
Helix 24
AC6
I
455 480Right-handed alpha
Helix 25
AC7
I
495 508Right-handed alpha
Helix 26
AC8
I
519 527Right-handed alpha
Helix 27
AC9
I
609 614Right-handed alpha
Helix 28
AD1
I
670 674Right-handed 310
Helix 29
AD2
I
675 688Right-handed alpha
Helix 30
AD3
I
704 711Right-handed alpha
Helix 31
AD4
I
738 741Right-handed 310
Helix 32
AD5
I
820 825Right-handed alpha
Helix 33
AD6
I
858 863Right-handed alpha
Helix 34
AD7
I
942 979Right-handed alpha
Helix 35
AD8
I
987 991Right-handed 310
Helix 36
AD9
I
1005 1038Right-handed alpha
Helix 37
AE1
I
1101 1106Right-handed alpha
Helix 38
AE2
I
1109 1134Right-handed alpha
Helix 39
AE3
I
1137 1151Right-handed alpha
Helix 40
AE4
I
1160 1164Right-handed 310
Helix 41
AE5
I
1167 1177Right-handed alpha
Helix 42
AE6
I
1191 1202Right-handed alpha
Helix 43
AE7
I
1271 1281Right-handed alpha
Helix 44
AE8
I
1284 1292Right-handed alpha
Helix 45
AE9
I
1297 1310Right-handed alpha
Helix 46
AF1
I
1320 1332Right-handed alpha
Helix 47
AF2
J
26 33Right-handed alpha
Helix 48
AF3
J
77 81Right-handed 310
Helix 49
AF4
J
94 100Right-handed 310
Helix 50
AF5
J
124 129Right-handed alpha
Helix 51
AF6
J
131 140Right-handed alpha
Helix 52
AF7
J
161 172Right-handed alpha
Helix 53
AF8
J
181 191Right-handed alpha
Helix 54
AF9
J
193 208Right-handed alpha
Helix 55
AG1
J
210 229Right-handed alpha
Helix 56
AG2
J
233 236Right-handed 310
Helix 57
AG3
J
246 250Right-handed 310
Helix 58
AG4
J
263 285Right-handed alpha
Helix 59
AG5
J
288 308Right-handed alpha
Helix 60
AG6
J
327 332Right-handed alpha
Helix 61
AG7
J
370 377Right-handed alpha
Helix 62
AG8
J
377 389Right-handed alpha
Helix 63
AG9
J
393 404Right-handed alpha
Helix 64
AH1
J
407 417Right-handed alpha
Helix 65
AH2
J
430 432Right-handed 310
Helix 66
AH3
J
451 456Right-handed 310
Helix 67
AH4
J
473 483Right-handed alpha
Helix 68
AH5
J
504 514Right-handed alpha
Helix 69
AH6
J
529 539Right-handed alpha
Helix 70
AH7
J
573 581Right-handed alpha
Helix 71
AH8
J
588 592Right-handed 310
Helix 72
AH9
J
598 613Right-handed alpha
Helix 73
AI1
J
614 636Right-handed alpha
Helix 74
AI2
J
649 669Right-handed alpha
Helix 75
AI3
J
674 703Right-handed alpha
Helix 76
AI4
J
720 728Right-handed alpha
Helix 77
AI5
J
733 742Right-handed alpha
Helix 78
AI6
J
768 804Right-handed alpha
Helix 79
AI7
J
865 876Right-handed alpha
Helix 80
AI8
J
884 888Right-handed 310
Helix 81
AI9
J
914 925Right-handed alpha
Helix 82
AJ1
J
926 928Right-handed 310
Helix 83
AJ2
J
1068 1073Right-handed alpha
Helix 84
AJ3
J
1137 1146Right-handed alpha
Helix 85
AJ4
J
1216 1224Right-handed alpha
Helix 86
AJ5
J
1226 1244Right-handed alpha
Helix 87
AJ6
J
1249 1261Right-handed alpha
Helix 88
AJ7
J
1282 1294Right-handed alpha
Helix 89
AJ8
J
1308 1315Right-handed alpha
Helix 90
AJ9
J
1318 1325Right-handed alpha
Helix 91
AK1
J
1327 1339Right-handed alpha
Helix 92
AK2
J
1346 1354Right-handed alpha
Helix 93
AK3
J
1360 1372Right-handed alpha
Helix 94
AK4
K
6 12Right-handed alpha
Helix 95
AK5
K
17 32Right-handed alpha
Helix 96
AK6
K
45 57Right-handed alpha
Helix 97
AK7
K
60 84Right-handed alpha
Helix 98
AK8
N
18 33Right-handed alpha
Helix 99
AK9
N
35 37Right-handed 310
Helix 100
AL1
N
76 86Right-handed alpha
Helix 101
AL2
N
104 117Right-handed alpha
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There are 45 sheets in PDB entry 6C6U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
12 13first strand
Strand 2
G
25 32anti-parallel
Strand 3
G
198 204anti-parallel
Strand 4
G
184 189anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
52 53first strand
Strand 2
G
149 153anti-parallel
Strand 3
G
175 177anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
115 116first strand
Strand 2
G
97 105anti-parallel
Strand 3
G
139 147anti-parallel
Strand 4
G
56 61anti-parallel
Strand 5
G
171 172anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
90 91first strand
Strand 2
G
122 123anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
108 111first strand
Strand 2
G
129 133anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
23 31first strand
Strand 2
H
199 207anti-parallel
Strand 3
H
180 185anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
53 61first strand
Strand 2
H
142 149anti-parallel
Strand 3
H
97 101anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
90 91first strand
Strand 2
H
122 123anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
108 111first strand
Strand 2
H
129 133anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
152 153first strand
Strand 2
H
175 176anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
13 14first strand
Strand 2
I
1182 1183parallel
Strand 3
I
700 701parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
59 60first strand
Strand 2
I
66 75anti-parallel
Strand 3
I
93 104anti-parallel
Strand 4
I
117 128anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
136 137first strand
Strand 2
I
142 145anti-parallel
Strand 3
I
512 514anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
451 454first strand
Strand 2
I
147 151anti-parallel
Strand 3
I
530 531parallel
Strand 4
I
572 573anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
154 158first strand
Strand 2
I
173 177anti-parallel
Strand 3
I
184 188anti-parallel
Strand 4
I
194 197anti-parallel
Strand 5
I
203 205anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
228 231first strand
Strand 2
I
332 335anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
239 240first strand
Strand 2
I
284 285anti-parallel
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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
255 257first strand
Strand 2
I
260 263anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
301 302first strand
Strand 2
I
309 311anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
580 581first strand
Strand 2
I
587 594anti-parallel
Strand 3
I
599 606anti-parallel
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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
580 581first strand
Strand 2
I
587 594anti-parallel
Strand 3
I
652 653anti-parallel
Strand 4
I
616 617parallel
Strand 5
I
634 637anti-parallel
Strand 6
I
642 645anti-parallel
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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
748 752first strand
Strand 2
I
731 736anti-parallel
Strand 3
I
722 727anti-parallel
Strand 4
I
776 777anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
757 758first strand
Strand 2
I
764 765anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
768 769first strand
Strand 2
I
784 785anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
789 790first strand
Strand 2
I
793 794anti-parallel
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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1066 1067first strand
Strand 2
I
1225 1234anti-parallel
Strand 3
I
798 804anti-parallel
Strand 4
I
1096 1098parallel
Strand 5
I
816 819anti-parallel
Strand 6
I
1076 1080parallel
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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1066 1067first strand
Strand 2
I
1225 1234anti-parallel
Strand 3
I
1209 1210anti-parallel
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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
846 847first strand
Strand 2
I
830 843anti-parallel
Strand 3
I
1046 1058anti-parallel
Strand 4
I
926 935anti-parallel
Strand 5
I
876 877anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
882 884first strand
Strand 2
I
918 919anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
887 888first strand
Strand 2
I
914 915anti-parallel
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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1244 1246first strand
Strand 2
J
350 356anti-parallel
Strand 3
J
465 469anti-parallel
Strand 4
J
421 425anti-parallel
Strand 5
J
434 442anti-parallel
Strand 6
J
365 369parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1244 1246first strand
Strand 2
J
350 356anti-parallel
Strand 3
J
447 448parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1269 1270first strand
Strand 2
J
345 346anti-parallel
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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1335 1337first strand
Strand 2
J
20 24anti-parallel
Strand 3
J
1341 1342anti-parallel
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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
34 37first strand
Strand 2
J
102 112parallel
Strand 3
J
238 244anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
144 145first strand
Strand 2
J
159 160anti-parallel
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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
526 527first strand
Strand 2
J
548 556parallel
Strand 3
J
564 572anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
820 822first strand
Strand 2
J
880 882anti-parallel
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There are 5 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
949 950first strand
Strand 2
J
1018 1019anti-parallel
Strand 3
J
1002 1003anti-parallel
Strand 4
J
973 975anti-parallel
Strand 5
J
965 967anti-parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
957 961first strand
Strand 2
J
980 985anti-parallel
Strand 3
J
991 997anti-parallel
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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1035 1038first strand
Strand 2
J
1077 1080anti-parallel
Strand 3
J
1099 1100anti-parallel
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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1046 1049first strand
Strand 2
J
1058 1061anti-parallel
Strand 3
J
1105 1107anti-parallel
Strand 4
J
1122 1123anti-parallel
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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1162 1165first strand
Strand 2
J
1173 1178anti-parallel
Strand 3
J
1186 1190anti-parallel
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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1279 1281first strand
Strand 2
J
1263 1268anti-parallel
Strand 3
J
1301 1304anti-parallel
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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
N
39 43first strand
Strand 2
N
68 73anti-parallel
Strand 3
N
8 14anti-parallel
Strand 4
N
89 92anti-parallel
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