Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6CZZ entry

There are 4 chains in PDB entry 6CZZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 71	ALA 430
B	ALA 71	ALA 430
C	ALA 71	ALA 430
D	ALA 71	GLN 264

There are 73 helices in PDB entry 6CZZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	84	95	Right-handed alpha
Helix 2	AA2	A	97	101	Right-handed 310
Helix 3	AA3	A	104	108	Right-handed 310
Helix 4	AA4	A	112	131	Right-handed alpha
Helix 5	AA5	A	143	157	Right-handed alpha
Helix 6	AA6	A	169	180	Right-handed alpha
Helix 7	AA7	A	192	195	Right-handed 310
Helix 8	AA8	A	201	205	Right-handed 310
Helix 9	AA9	A	243	246	Right-handed 310
Helix 10	AB1	A	252	256	Right-handed 310
Helix 11	AB2	A	280	282	Right-handed 310
Helix 12	AB3	A	290	293	Right-handed 310
Helix 13	AB4	A	294	301	Right-handed alpha
Helix 14	AB5	A	309	326	Right-handed alpha
Helix 15	AB6	A	328	349	Right-handed alpha
Helix 16	AB7	A	359	363	Right-handed 310
Helix 17	AB8	A	374	376	Right-handed 310
Helix 18	AB9	A	377	388	Right-handed alpha
Helix 19	AC1	A	411	429	Right-handed alpha
Helix 20	AC2	B	84	95	Right-handed alpha
Helix 21	AC3	B	97	101	Right-handed 310
Helix 22	AC4	B	104	108	Right-handed 310
Helix 23	AC5	B	112	131	Right-handed alpha
Helix 24	AC6	B	143	157	Right-handed alpha
Helix 25	AC7	B	169	180	Right-handed alpha
Helix 26	AC8	B	192	195	Right-handed 310
Helix 27	AC9	B	243	246	Right-handed 310
Helix 28	AD1	B	252	256	Right-handed 310
Helix 29	AD2	B	280	282	Right-handed 310
Helix 30	AD3	B	290	293	Right-handed 310
Helix 31	AD4	B	294	301	Right-handed alpha
Helix 32	AD5	B	309	326	Right-handed alpha
Helix 33	AD6	B	328	349	Right-handed alpha
Helix 34	AD7	B	359	363	Right-handed 310
Helix 35	AD8	B	374	376	Right-handed 310
Helix 36	AD9	B	377	388	Right-handed alpha
Helix 37	AE1	B	411	429	Right-handed alpha
Helix 38	AE2	C	84	95	Right-handed alpha
Helix 39	AE3	C	97	101	Right-handed 310
Helix 40	AE4	C	104	108	Right-handed 310
Helix 41	AE5	C	112	131	Right-handed alpha
Helix 42	AE6	C	143	157	Right-handed alpha
Helix 43	AE7	C	169	180	Right-handed alpha
Helix 44	AE8	C	192	195	Right-handed 310
Helix 45	AE9	C	201	205	Right-handed 310
Helix 46	AF1	C	243	246	Right-handed 310
Helix 47	AF2	C	252	256	Right-handed 310
Helix 48	AF3	C	280	282	Right-handed 310
Helix 49	AF4	C	290	293	Right-handed 310
Helix 50	AF5	C	294	301	Right-handed alpha
Helix 51	AF6	C	309	326	Right-handed alpha
Helix 52	AF7	C	328	349	Right-handed alpha
Helix 53	AF8	C	359	363	Right-handed 310
Helix 54	AF9	C	374	376	Right-handed 310
Helix 55	AG1	C	377	388	Right-handed alpha
Helix 56	AG2	C	411	429	Right-handed alpha
Helix 57	AG3	D	84	95	Right-handed alpha
Helix 58	AG4	D	104	108	Right-handed 310
Helix 59	AG5	D	112	131	Right-handed alpha
Helix 60	AG6	D	143	157	Right-handed alpha
Helix 61	AG7	D	169	180	Right-handed alpha
Helix 62	AG8	D	192	195	Right-handed 310
Helix 63	AG9	D	243	246	Right-handed 310
Helix 64	AH1	D	252	256	Right-handed 310
Helix 65	AH2	D	280	282	Right-handed 310
Helix 66	AH3	D	290	293	Right-handed 310
Helix 67	AH4	D	294	301	Right-handed alpha
Helix 68	AH5	D	309	326	Right-handed alpha
Helix 69	AH6	D	328	350	Right-handed alpha
Helix 70	AH7	D	359	363	Right-handed 310
Helix 71	AH8	D	374	376	Right-handed 310
Helix 72	AH9	D	377	388	Right-handed alpha
Helix 73	AI1	D	411	429	Right-handed alpha

There are 16 sheets in PDB entry 6CZZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	75	first strand
Strand 2	A	390	391	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	136	141	first strand
Strand 2	A	273	278	anti-parallel
Strand 3	A	258	262	anti-parallel
Strand 4	A	237	241	parallel
Strand 5	A	213	217	parallel
Strand 6	A	162	167	parallel
Strand 7	A	184	190	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	219	220	first strand
Strand 2	A	225	226	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	355	first strand
Strand 2	A	367	372	anti-parallel
Strand 3	A	402	405	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	75	first strand
Strand 2	B	390	391	parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	136	141	first strand
Strand 2	B	273	278	anti-parallel
Strand 3	B	258	262	anti-parallel
Strand 4	B	237	241	parallel
Strand 5	B	213	217	parallel
Strand 6	B	162	167	parallel
Strand 7	B	184	190	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	219	220	first strand
Strand 2	B	225	226	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	355	first strand
Strand 2	B	367	372	anti-parallel
Strand 3	B	402	405	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	74	75	first strand
Strand 2	C	390	391	parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	141	first strand
Strand 2	C	273	278	anti-parallel
Strand 3	C	258	262	anti-parallel
Strand 4	C	237	241	parallel
Strand 5	C	213	217	parallel
Strand 6	C	162	167	parallel
Strand 7	C	184	190	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	219	220	first strand
Strand 2	C	225	226	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	355	first strand
Strand 2	C	367	372	anti-parallel
Strand 3	C	402	405	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	74	75	first strand
Strand 2	D	390	391	parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	136	141	first strand
Strand 2	D	273	278	anti-parallel
Strand 3	D	258	262	anti-parallel
Strand 4	D	237	241	parallel
Strand 5	D	213	217	parallel
Strand 6	D	162	167	parallel
Strand 7	D	184	190	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	219	220	first strand
Strand 2	D	225	226	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	354	355	first strand
Strand 2	D	367	372	anti-parallel
Strand 3	D	402	405	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6CZZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6CZZ