Analysis of interatomic Contacts of Structural Units in PDB entry:
6DEE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DEE entry

There is 1 chain in PDB entry 6DEE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 308GLU 713
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6DEE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
311 325Right-handed alpha
Helix 2
AA2
A
327 346Right-handed alpha
Helix 3
AA3
A
349 360Right-handed alpha
Helix 4
AA4
A
376 390Right-handed alpha
Helix 5
AA5
A
391 391Right-handed 310
Helix 6
AA6
A
400 405Right-handed 310
Helix 7
AA7
A
406 424Right-handed alpha
Helix 8
AA8
A
425 434Right-handed alpha
Helix 9
AA9
A
438 451Right-handed alpha
Helix 10
AB1
A
453 469Right-handed alpha
Helix 11
AB2
A
471 481Right-handed alpha
Helix 12
AB3
A
482 494Right-handed alpha
Helix 13
AB4
A
497 512Right-handed alpha
Helix 14
AB5
A
519 524Right-handed alpha
Helix 15
AB6
A
527 540Right-handed alpha
Helix 16
AB7
A
550 562Right-handed alpha
Helix 17
AB8
A
571 580Right-handed alpha
Helix 18
AB9
A
583 597Right-handed alpha
Helix 19
AC1
A
612 622Right-handed alpha
Helix 20
AC2
A
624 629Right-handed alpha
Helix 21
AC3
A
632 650Right-handed alpha
Helix 22
AC4
A
656 671Right-handed alpha
Helix 23
AC5
A
672 677Right-handed alpha
Helix 24
AC6
A
680 692Right-handed alpha
Helix 25
AC7
A
697 711Right-handed alpha
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There are no sheets in PDB entry 6DEE
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