Analysis of interatomic Contacts of Structural Units in PDB entry:
6DWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6DWY entry

There are 4 chains in PDB entry 6DWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 81LYS 609
B
 A 1 G 16
C
 C 1 C 25
D
 G 1 C 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6DWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
87 106Right-handed alpha
Helix 2
AA2
A
108 112Right-handed 310
Helix 3
AA3
A
114 132Right-handed alpha
Helix 4
AA4
A
136 141Right-handed alpha
Helix 5
AA5
A
143 172Right-handed alpha
Helix 6
AA6
A
220 233Right-handed alpha
Helix 7
AA7
A
250 257Right-handed alpha
Helix 8
AA8
A
265 280Right-handed alpha
Helix 9
AA9
A
281 283Right-handed 310
Helix 10
AB1
A
284 301Right-handed alpha
Helix 11
AB2
A
320 332Right-handed alpha
Helix 12
AB3
A
332 343Right-handed alpha
Helix 13
AB4
A
346 351Right-handed alpha
Helix 14
AB5
A
353 374Right-handed alpha
Helix 15
AB6
A
381 383Right-handed 310
Helix 16
AB7
A
384 396Right-handed alpha
Helix 17
AB8
A
406 420Right-handed alpha
Helix 18
AB9
A
421 425Right-handed 310
Helix 19
AC1
A
426 435Right-handed alpha
Helix 20
AC2
A
445 467Right-handed alpha
Helix 21
AC3
A
519 529Right-handed alpha
Helix 22
AC4
A
539 544Right-handed alpha
Helix 23
AC5
A
551 562Right-handed alpha
Helix 24
AC6
A
568 582Right-handed alpha
Helix 25
AC7
A
590 607Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6DWY.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 213first strand
Strand 2
A
190 199anti-parallel
Strand 3
A
175 183anti-parallel
Strand 4
A
244 247parallel
Strand 5
A
261 264parallel
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