Analysis of interatomic Contacts of Structural Units in PDB entry:
6EIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EIE entry

There is 1 chain in PDB entry 6EIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ALA 561PRO 1040
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6EIE. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
573 577Right-handed 310
Helix 2
AA2
A
603 612Right-handed alpha
Helix 3
AA3
A
618 629Right-handed alpha
Helix 4
AA4
A
630 632Right-handed 310
Helix 5
AA5
A
634 647Right-handed alpha
Helix 6
AA6
A
654 662Right-handed alpha
Helix 7
AA7
A
669 679Right-handed alpha
Helix 8
AA8
A
679 698Right-handed alpha
Helix 9
AA9
A
699 705Right-handed alpha
Helix 10
AB1
A
705 717Right-handed alpha
Helix 11
AB2
A
724 741Right-handed alpha
Helix 12
AB3
A
768 772Right-handed 310
Helix 13
AB4
A
778 796Right-handed alpha
Helix 14
AB5
A
798 809Right-handed 310
Helix 15
AB6
A
811 816Right-handed alpha
Helix 16
AB7
A
816 840Right-handed alpha
Helix 17
AB8
A
842 864Right-handed alpha
Helix 18
AB9
A
865 877Right-handed alpha
Helix 19
AC1
A
878 883Right-handed alpha
Helix 20
AC2
A
884 890Right-handed alpha
Helix 21
AC3
A
892 917Right-handed alpha
Helix 22
AC4
A
927 942Right-handed alpha
Helix 23
AC5
A
955 971Right-handed alpha
Helix 24
AC6
A
982 991Right-handed alpha
Helix 25
AC7
A
999 1015Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EIE.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
584 586first strand
Strand 2
A
599 602anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il