Analysis of interatomic Contacts of Structural Units in PDB entry:
6EIT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EIT entry

There are 4 chains in PDB entry 6EIT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 THR 26PHE 305
2
 GLY 8GLN 271
3
 GLY 1SER 231
4
 GLN 1THR 85
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6EIT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
46 50Right-handed 310
Helix 2
AA2
1
56 61Right-handed alpha
Helix 3
AA3
1
76 81Right-handed alpha
Helix 4
AA4
1
119 125Right-handed alpha
Helix 5
AA5
1
174 179Right-handed 310
Helix 6
AA6
1
231 236Right-handed 310
Helix 7
AA7
1
289 293Right-handed 310
Helix 8
AA8
2
35 37Right-handed 310
Helix 9
AA9
2
43 47Right-handed 310
Helix 10
AB1
2
82 86Right-handed alpha
Helix 11
AB2
2
91 98Right-handed alpha
Helix 12
AB3
2
185 192Right-handed 310
Helix 13
AB4
3
42 46Right-handed 310
Helix 14
AB5
3
97 104Right-handed alpha
Helix 15
AB6
3
143 148Right-handed alpha
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There are 14 sheets in PDB entry 6EIT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
85 86first strand
Strand 2
1
255 273anti-parallel
Strand 3
1
127 144anti-parallel
Strand 4
1
195 198anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
90 94first strand
Strand 2
1
255 273anti-parallel
Strand 3
1
127 144anti-parallel
Strand 4
1
207 208anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
107 111first strand
Strand 2
1
241 246anti-parallel
Strand 3
1
156 162anti-parallel
Strand 4
1
184 188anti-parallel
Strand 5
3
13 14anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
14 18first strand
Strand 2
2
21 25anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
32 33first strand
Strand 2
2
204 209parallel
Strand 3
2
99 111anti-parallel
Strand 4
2
246 262anti-parallel
Strand 5
2
64 65anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
32 33first strand
Strand 2
2
204 209parallel
Strand 3
2
99 111anti-parallel
Strand 4
2
246 262anti-parallel
Strand 5
2
69 71anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
155 156first strand
Strand 2
2
78 81anti-parallel
Strand 3
2
226 232anti-parallel
Strand 4
2
121 128anti-parallel
Strand 5
2
195 198anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
51 52first strand
Strand 2
3
207 215anti-parallel
Strand 3
3
70 72anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
51 52first strand
Strand 2
3
207 215anti-parallel
Strand 3
3
113 119anti-parallel
Strand 4
3
162 167anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
83 85first strand
Strand 2
3
188 198anti-parallel
Strand 3
3
126 134anti-parallel
Strand 4
3
151 156anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
3
176 177first strand
Strand 2
3
108 110anti-parallel
Strand 3
3
220 222anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
2 4first strand
Strand 2
4
17 23anti-parallel
Strand 3
4
51 54anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
8 10first strand
Strand 2
4
79 81parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
4
31 34first strand
Strand 2
4
64 67anti-parallel
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