Analysis of interatomic Contacts of Structural Units in PDB entry:
6EMP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6EMP entry

There is 1 chain in PDB entry 6EMP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 339ASP 1404
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 6EMP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
346 362Right-handed alpha
Helix 2
AA2
A
369 383Right-handed alpha
Helix 3
AA3
A
386 393Right-handed alpha
Helix 4
AA4
A
393 404Right-handed alpha
Helix 5
AA5
A
409 429Right-handed alpha
Helix 6
AA6
A
1381 1389Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6EMP.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 364first strand
Strand 2
A
367 368anti-parallel
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