Analysis of interatomic Contacts of Structural Units in PDB entry:
6F2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6F2R entry

There are 21 chains in PDB entry 6F2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
UNK 20LEU 164
C
UNK 20LEU 165
D
SER 70GLY 149
E
UNK 20LEU 164
T
MET 1LYS 144
G
UNK 20LEU 165
I
UNK 20LEU 164
V
MET 1LYS 144
K
UNK 20LEU 165
M
UNK 1UNK 10
N
UNK 1UNK 7
O
UNK 1UNK 6
Q
MET 1LYS 144
F
SER 70ARG 148
J
SER 70ARG 148
1
UNK 1UNK 5
2
UNK 1UNK 5
3
UNK 1UNK 5
W
UNK 1UNK 12
X
UNK 1UNK 12
Y
UNK 1UNK 12
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 6F2R. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
D
79 83Right-handed 310
Helix 2
AA2
I
84 88Right-handed 310
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There are 23 sheets in PDB entry 6F2R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
73 75first strand
Strand 2
A
145 147anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 93first strand
Strand 2
A
96 100anti-parallel
Strand 3
A
112 122anti-parallel
Strand 4
Q
112 118anti-parallel
Strand 5
Q
94 97anti-parallel
Strand 6
Q
86 89anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
135 136first strand
Strand 2
C
163 164parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
73 79first strand
Strand 2
C
141 147anti-parallel
Strand 3
C
133 136anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
89 91first strand
Strand 2
C
96 100anti-parallel
Strand 3
C
112 122anti-parallel
Strand 4
C
103 106anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
89 91first strand
Strand 2
C
96 100anti-parallel
Strand 3
C
112 122anti-parallel
Strand 4
D
113 120anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
73 78first strand
Strand 2
D
142 147anti-parallel
Strand 3
D
134 136anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
67 69first strand
Strand 2
E
73 76anti-parallel
Strand 3
E
142 147anti-parallel
Strand 4
E
133 136anti-parallel
Strand 5
G
161 164parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
89 93first strand
Strand 2
E
96 100anti-parallel
Strand 3
E
112 122anti-parallel
Strand 4
T
112 118anti-parallel
Strand 5
T
94 97anti-parallel
Strand 6
T
86 89anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
159 160first strand
Strand 2
G
90 93anti-parallel
Strand 3
G
96 100anti-parallel
Strand 4
G
118 122anti-parallel
Strand 5
F
111 114anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
T
73 76first strand
Strand 2
T
138 141anti-parallel
Strand 3
T
131 133anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
73 79first strand
Strand 2
G
141 147anti-parallel
Strand 3
G
133 136anti-parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
67 69first strand
Strand 2
I
73 78anti-parallel
Strand 3
I
142 147anti-parallel
Strand 4
I
133 136anti-parallel
Strand 5
K
163 164parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
89 93first strand
Strand 2
I
96 100anti-parallel
Strand 3
I
121 122anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
112 119first strand
Strand 2
V
110 119anti-parallel
Strand 3
V
93 97anti-parallel
Strand 4
V
88 90anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
112 119first strand
Strand 2
V
110 119anti-parallel
Strand 3
V
100 103anti-parallel
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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
3 4first strand
Strand 2
J
89 92anti-parallel
Strand 3
J
96 100anti-parallel
Strand 4
J
113 122anti-parallel
Strand 5
K
113 122anti-parallel
Strand 6
K
96 100anti-parallel
Strand 7
K
89 91anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
V
74 75first strand
Strand 2
V
138 140anti-parallel
Strand 3
V
132 134anti-parallel
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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
73 79first strand
Strand 2
K
141 147anti-parallel
Strand 3
K
133 136anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
Q
72 76first strand
Strand 2
Q
138 143anti-parallel
Strand 3
Q
129 133anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
75 79first strand
Strand 2
F
141 145anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
88 91first strand
Strand 2
F
96 101anti-parallel
Strand 3
F
118 122anti-parallel
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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
77 79first strand
Strand 2
J
141 143anti-parallel
Strand 3
J
135 136anti-parallel
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