Analysis of interatomic Contacts of Structural Units in PDB entry:
6FW2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FW2 entry

There is 1 chain in PDB entry 6FW2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
MET 52GLY 336
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6FW2. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
109 115Right-handed 310
Helix 2
AA2
A
1002 1012Right-handed alpha
Helix 3
AA3
A
1038 1051Right-handed alpha
Helix 4
AA4
A
1059 1080Right-handed alpha
Helix 5
AA5
A
1084 1091Right-handed alpha
Helix 6
AA6
A
1092 1107Right-handed alpha
Helix 7
AA7
A
1107 1113Right-handed alpha
Helix 8
AA8
A
1114 1123Right-handed alpha
Helix 9
AA9
A
1125 1134Right-handed alpha
Helix 10
AB1
A
1136 1142Right-handed alpha
Helix 11
AB2
A
1142 1156Right-handed alpha
Helix 12
AB3
A
162 174Right-handed alpha
Helix 13
AB4
A
191 196Right-handed alpha
Helix 14
AB5
A
218 226Right-handed alpha
Helix 15
AB6
A
233 238Right-handed 310
Helix 16
AB7
A
249 254Right-handed 310
Helix 17
AB8
A
273 278Right-handed 310
Helix 18
AB9
A
290 298Right-handed alpha
Helix 19
AC1
A
301 305Right-handed 310
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There are 5 sheets in PDB entry 6FW2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
72 74first strand
Strand 2
A
53 63anti-parallel
Strand 3
A
331 334anti-parallel
Strand 4
A
256 259anti-parallel
Strand 5
A
262 271anti-parallel
Strand 6
A
313 322anti-parallel
Strand 7
A
213 217anti-parallel
Strand 8
A
241 244parallel
Strand 9
A
53 63anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
89 90first strand
Strand 2
A
83 86anti-parallel
Strand 3
A
76 80anti-parallel
Strand 4
A
324 327anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
94 97first strand
Strand 2
A
179 182anti-parallel
Strand 3
A
154 160anti-parallel
Strand 4
A
146 151anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
116 120first strand
Strand 2
A
123 127anti-parallel
Strand 3
A
134 137anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1014 1019first strand
Strand 2
A
1025 1028anti-parallel
Strand 3
A
1031 1034anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il