Analysis of interatomic Contacts of Structural Units in PDB entry:
6FXX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6FXX entry

There is 1 chain in PDB entry 6FXX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 33PRO 738
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 6FXX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 37Right-handed 310
Helix 2
AA2
A
49 62Right-handed alpha
Helix 3
AA3
A
86 98Right-handed alpha
Helix 4
AA4
A
121 133Right-handed alpha
Helix 5
AA5
A
147 152Right-handed 310
Helix 6
AA6
A
173 181Right-handed alpha
Helix 7
AA7
A
190 200Right-handed alpha
Helix 8
AA8
A
201 208Right-handed alpha
Helix 9
AA9
A
258 267Right-handed alpha
Helix 10
AB1
A
310 318Right-handed alpha
Helix 11
AB2
A
319 321Right-handed 310
Helix 12
AB3
A
324 326Right-handed 310
Helix 13
AB4
A
336 338Right-handed 310
Helix 14
AB5
A
339 354Right-handed alpha
Helix 15
AB6
A
361 365Right-handed 310
Helix 16
AB7
A
367 381Right-handed alpha
Helix 17
AB8
A
401 409Right-handed alpha
Helix 18
AB9
A
443 449Right-handed alpha
Helix 19
AC1
A
469 475Right-handed alpha
Helix 20
AC2
A
488 499Right-handed alpha
Helix 21
AC3
A
527 532Right-handed 310
Helix 22
AC4
A
536 545Right-handed alpha
Helix 23
AC5
A
548 554Right-handed alpha
Helix 24
AC6
A
573 588Right-handed alpha
Helix 25
AC7
A
619 630Right-handed alpha
Helix 26
AC8
A
630 639Right-handed alpha
Back to top of page

There are 11 sheets in PDB entry 6FXX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
39 44parallel
Strand 3
A
107 111parallel
Strand 4
A
163 172anti-parallel
Strand 5
A
136 141anti-parallel
Strand 6
A
210 213parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
116 118first strand
Strand 2
A
251 253anti-parallel
Strand 3
A
219 221parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 233first strand
Strand 2
A
238 242anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
278 279anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
356 360first strand
Strand 2
A
328 334parallel
Strand 3
A
298 304parallel
Strand 4
A
387 392parallel
Strand 5
A
464 468anti-parallel
Strand 6
A
413 416anti-parallel
Strand 7
A
504 507parallel
Strand 8
A
455 457anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
395 397first strand
Strand 2
A
513 515anti-parallel
Strand 3
A
418 420parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 429first strand
Strand 2
A
460 461anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
438 439anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
560 563first strand
Strand 2
A
566 570anti-parallel
Strand 3
A
707 712anti-parallel
Strand 4
A
673 678anti-parallel
Strand 5
A
729 736anti-parallel
Strand 6
A
648 656anti-parallel
Strand 7
A
611 613anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
599 600first strand
Strand 2
A
664 669anti-parallel
Strand 3
A
719 721anti-parallel
Strand 4
A
691 693anti-parallel
Strand 5
A
698 700anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
686 688first strand
Strand 2
A
724 727anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il