Analysis of interatomic Contacts of Structural Units in PDB entry:
6H25


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6H25 entry

There are 12 chains in PDB entry 6H25 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 2ILE 288
B
LEU 6GLY 244
C
GLU 12PRO 275
D
GLY 25LYS 234
E
VAL 4LEU 290
F
ASP 4ARG 266
G
ALA 17CYS 257
H
MET 1GLY 293
I
VAL 5GLU 60
J
MET 1GLU 929
K
GLU 60LYS 96
R
U 39 U 44
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 6H25. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
7 19Right-handed alpha
Helix 2
AA2
A
95 113Right-handed alpha
Helix 3
AA3
A
144 160Right-handed alpha
Helix 4
AA4
A
210 216Right-handed alpha
Helix 5
AA5
A
243 277Right-handed alpha
Helix 6
AA6
B
61 65Right-handed 310
Helix 7
AA7
B
92 110Right-handed alpha
Helix 8
AA8
B
112 116Right-handed 310
Helix 9
AA9
B
133 150Right-handed alpha
Helix 10
AB1
B
174 181Right-handed alpha
Helix 11
AB2
B
209 244Right-handed alpha
Helix 12
AB3
C
13 19Right-handed alpha
Helix 13
AB4
C
99 117Right-handed alpha
Helix 14
AB5
C
120 123Right-handed 310
Helix 15
AB6
C
147 162Right-handed alpha
Helix 16
AB7
C
211 217Right-handed alpha
Helix 17
AB8
C
244 273Right-handed alpha
Helix 18
AB9
D
65 69Right-handed 310
Helix 19
AC1
D
88 106Right-handed alpha
Helix 20
AC2
D
128 145Right-handed alpha
Helix 21
AC3
D
170 177Right-handed alpha
Helix 22
AC4
D
202 232Right-handed alpha
Helix 23
AC5
E
7 19Right-handed alpha
Helix 24
AC6
E
97 113Right-handed alpha
Helix 25
AC7
E
120 123Right-handed 310
Helix 26
AC8
E
147 162Right-handed alpha
Helix 27
AC9
E
215 221Right-handed alpha
Helix 28
AD1
E
248 280Right-handed alpha
Helix 29
AD2
F
16 21Right-handed alpha
Helix 30
AD3
F
117 131Right-handed alpha
Helix 31
AD4
F
156 173Right-handed alpha
Helix 32
AD5
F
200 206Right-handed alpha
Helix 33
AD6
F
233 266Right-handed alpha
Helix 34
AD7
G
144 146Right-handed 310
Helix 35
AD8
G
203 211Right-handed alpha
Helix 36
AD9
G
216 225Right-handed alpha
Helix 37
AE1
G
243 256Right-handed alpha
Helix 38
AE2
H
111 113Right-handed 310
Helix 39
AE3
H
175 179Right-handed 310
Helix 40
AE4
H
227 247Right-handed alpha
Helix 41
AE5
H
252 264Right-handed alpha
Helix 42
AE6
H
267 272Right-handed 310
Helix 43
AE7
H
273 291Right-handed alpha
Helix 44
AE8
J
69 76Right-handed alpha
Helix 45
AE9
J
76 81Right-handed alpha
Helix 46
AF1
J
92 102Right-handed alpha
Helix 47
AF2
J
102 115Right-handed alpha
Helix 48
AF3
J
140 163Right-handed alpha
Helix 49
AF4
J
177 188Right-handed alpha
Helix 50
AF5
J
194 200Right-handed alpha
Helix 51
AF6
J
203 207Right-handed 310
Helix 52
AF7
J
233 244Right-handed alpha
Helix 53
AF8
J
298 302Right-handed 310
Helix 54
AF9
J
425 437Right-handed alpha
Helix 55
AG1
J
445 451Right-handed alpha
Helix 56
AG2
J
460 464Right-handed 310
Helix 57
AG3
J
517 527Right-handed alpha
Helix 58
AG4
J
541 547Right-handed alpha
Helix 59
AG5
J
589 599Right-handed alpha
Helix 60
AG6
J
604 628Right-handed alpha
Helix 61
AG7
J
657 683Right-handed alpha
Helix 62
AG8
J
696 709Right-handed alpha
Helix 63
AG9
J
717 727Right-handed alpha
Helix 64
AH1
J
733 747Right-handed alpha
Helix 65
AH2
J
781 795Right-handed alpha
Helix 66
AH3
J
801 805Right-handed 310
Helix 67
AH4
J
806 842Right-handed alpha
Helix 68
AH5
J
881 885Right-handed 310
Helix 69
AH6
K
82 96Right-handed alpha
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There are 40 sheets in PDB entry 6H25. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 39first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
54 64anti-parallel
Strand 4
A
128 138anti-parallel
Strand 5
A
75 82parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
36 39first strand
Strand 2
A
45 49anti-parallel
Strand 3
A
54 64anti-parallel
Strand 4
A
128 138anti-parallel
Strand 5
A
122 124anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
161 162first strand
Strand 2
A
183 184anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
165 168first strand
Strand 2
A
171 174anti-parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
204 207first strand
Strand 2
A
192 199anti-parallel
Strand 3
A
219 225anti-parallel
Strand 4
A
230 237anti-parallel
Strand 5
B
195 206anti-parallel
Strand 6
B
184 190anti-parallel
Strand 7
B
158 165anti-parallel
Strand 8
B
168 171anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
25 29first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
46 52anti-parallel
Strand 4
B
120 129anti-parallel
Strand 5
B
71 78parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
35 39first strand
Strand 2
C
47 53anti-parallel
Strand 3
C
56 67anti-parallel
Strand 4
C
131 143anti-parallel
Strand 5
C
125 127anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
78 84first strand
Strand 2
C
131 143parallel
Strand 3
C
56 67anti-parallel
Strand 4
F
14 15anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
174 178first strand
Strand 2
C
164 171anti-parallel
Strand 3
C
184 186anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
206 208first strand
Strand 2
C
194 200anti-parallel
Strand 3
C
220 226anti-parallel
Strand 4
C
232 236anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
31 35first strand
Strand 2
D
43 49anti-parallel
Strand 3
D
52 62anti-parallel
Strand 4
D
115 124anti-parallel
Strand 5
D
75 81parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
165 167first strand
Strand 2
D
152 159anti-parallel
Strand 3
D
179 186anti-parallel
Strand 4
D
192 199anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
66 67first strand
Strand 2
E
131 143anti-parallel
Strand 3
E
125 127anti-parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
78 85first strand
Strand 2
E
131 143parallel
Strand 3
E
56 63anti-parallel
Strand 4
E
47 53anti-parallel
Strand 5
E
35 39anti-parallel
Strand 6
H
5 6parallel
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There are 8 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
210 212first strand
Strand 2
E
199 205anti-parallel
Strand 3
E
224 230anti-parallel
Strand 4
E
236 243anti-parallel
Strand 5
F
221 227anti-parallel
Strand 6
F
209 216anti-parallel
Strand 7
F
181 187anti-parallel
Strand 8
F
195 197anti-parallel
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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
39 43first strand
Strand 2
F
51 57anti-parallel
Strand 3
F
60 70anti-parallel
Strand 4
F
143 152anti-parallel
Strand 5
F
95 102parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
27 28first strand
Strand 2
G
84 88anti-parallel
Strand 3
G
100 103anti-parallel
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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
34 35first strand
Strand 2
G
77 80anti-parallel
Strand 3
G
71 74anti-parallel
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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
191 192first strand
Strand 2
G
162 169anti-parallel
Strand 3
G
177 179anti-parallel
Strand 4
G
139 142parallel
Strand 5
G
128 132anti-parallel
Strand 6
G
116 125anti-parallel
Strand 7
G
162 169anti-parallel
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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
199 201first strand
Strand 2
G
236 241anti-parallel
Strand 3
G
227 232anti-parallel
Strand 4
K
76 77anti-parallel
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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
26 27first strand
Strand 2
H
58 62anti-parallel
Strand 3
H
67 70anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
45 47first strand
Strand 2
H
52 54anti-parallel
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There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
164 165first strand
Strand 2
H
140 148anti-parallel
Strand 3
H
154 157anti-parallel
Strand 4
H
106 109parallel
Strand 5
H
95 99anti-parallel
Strand 6
H
83 91anti-parallel
Strand 7
H
140 148anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
170 173first strand
Strand 2
H
202 207anti-parallel
Strand 3
H
193 197anti-parallel
Strand 4
H
187 188anti-parallel
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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
7 8first strand
Strand 2
I
39 42anti-parallel
Strand 3
I
52 56anti-parallel
Strand 4
I
21 24parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
13 15first strand
Strand 2
I
32 35anti-parallel
Strand 3
I
26 29anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
2 7first strand
Strand 2
J
19 24anti-parallel
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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
66 68first strand
Strand 2
J
172 175parallel
Strand 3
J
191 193parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
87 91first strand
Strand 2
J
119 123parallel
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There are 5 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
274 278first strand
Strand 2
J
260 264anti-parallel
Strand 3
J
247 253anti-parallel
Strand 4
J
291 296anti-parallel
Strand 5
J
343 350anti-parallel
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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
356 361first strand
Strand 2
J
371 375anti-parallel
Strand 3
J
383 385anti-parallel
Strand 4
J
413 422parallel
Strand 5
J
396 404anti-parallel
Strand 6
J
356 361anti-parallel
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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
468 469first strand
Strand 2
J
572 583parallel
Strand 3
J
556 566anti-parallel
Strand 4
J
500 507anti-parallel
Strand 5
J
490 494anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
476 478first strand
Strand 2
J
586 588parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
530 531first strand
Strand 2
J
536 537anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
638 640first strand
Strand 2
J
650 652anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
687 690first strand
Strand 2
J
752 755anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
847 848first strand
Strand 2
J
909 910anti-parallel
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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
851 855first strand
Strand 2
J
859 864anti-parallel
Strand 3
J
869 874anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
886 887first strand
Strand 2
J
894 895anti-parallel
Strand 3
J
900 901anti-parallel
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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
912 914first strand
Strand 2
J
922 924anti-parallel
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