Analysis of interatomic Contacts of Structural Units in PDB entry:
6HTU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6HTU entry

There are 5 chains in PDB entry 6HTU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 G 75 C 93
F
 G 194 C 212
A
 HIS 180LEU 255
B
 HIS 180LEU 255
C
 GLY 284LYS 355
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 6HTU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
184 196Right-handed alpha
Helix 2
AA2
A
210 214Right-handed 310
Helix 3
AA3
A
233 250Right-handed alpha
Helix 4
AA4
B
184 196Right-handed alpha
Helix 5
AA5
B
233 249Right-handed alpha
Helix 6
AA6
C
286 293Right-handed alpha
Helix 7
AA7
C
336 347Right-handed alpha
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There are 4 sheets in PDB entry 6HTU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
200 208first strand
Strand 2
A
215 222anti-parallel
Strand 3
A
225 231anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 208first strand
Strand 2
B
215 222anti-parallel
Strand 3
B
225 231anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
304 308first strand
Strand 2
C
319 324anti-parallel
Strand 3
C
329 330anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
304 308first strand
Strand 2
C
319 324anti-parallel
Strand 3
C
333 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il