Analysis of interatomic Contacts of Structural Units in PDB entry:
6ICV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ICV entry

There are 4 chains in PDB entry 6ICV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 21TYR 502
C
 LEU 67GLU 83
B
 SER 21LYS 501
D
 LEU 67GLU 83
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6ICV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 38Right-handed alpha
Helix 2
AA2
A
45 63Right-handed alpha
Helix 3
AA3
A
74 77Right-handed 310
Helix 4
AA4
A
78 89Right-handed alpha
Helix 5
AA5
A
126 128Right-handed 310
Helix 6
AA6
A
131 136Right-handed alpha
Helix 7
AA7
A
139 146Right-handed alpha
Helix 8
AA8
A
146 152Right-handed alpha
Helix 9
AA9
A
152 166Right-handed alpha
Helix 10
AB1
A
172 177Right-handed alpha
Helix 11
AB2
A
185 189Right-handed 310
Helix 12
AB3
A
190 196Right-handed alpha
Helix 13
AB4
A
201 227Right-handed alpha
Helix 14
AB5
A
228 231Right-handed 310
Helix 15
AB6
A
233 237Right-handed 310
Helix 16
AB7
A
240 255Right-handed alpha
Helix 17
AB8
A
273 277Right-handed 310
Helix 18
AB9
A
317 326Right-handed alpha
Helix 19
AC1
A
349 361Right-handed alpha
Helix 20
AC2
A
378 389Right-handed alpha
Helix 21
AC3
A
391 400Right-handed alpha
Helix 22
AC4
A
403 410Right-handed alpha
Helix 23
AC5
A
419 439Right-handed alpha
Helix 24
AC6
A
444 455Right-handed alpha
Helix 25
AC7
A
458 495Right-handed alpha
Helix 26
AC8
B
22 38Right-handed alpha
Helix 27
AC9
B
45 63Right-handed alpha
Helix 28
AD1
B
74 77Right-handed 310
Helix 29
AD2
B
78 89Right-handed alpha
Helix 30
AD3
B
126 128Right-handed 310
Helix 31
AD4
B
131 136Right-handed alpha
Helix 32
AD5
B
139 146Right-handed alpha
Helix 33
AD6
B
146 152Right-handed alpha
Helix 34
AD7
B
152 166Right-handed alpha
Helix 35
AD8
B
172 177Right-handed alpha
Helix 36
AD9
B
185 189Right-handed 310
Helix 37
AE1
B
190 196Right-handed alpha
Helix 38
AE2
B
201 227Right-handed alpha
Helix 39
AE3
B
228 231Right-handed 310
Helix 40
AE4
B
233 237Right-handed 310
Helix 41
AE5
B
240 255Right-handed alpha
Helix 42
AE6
B
273 277Right-handed 310
Helix 43
AE7
B
317 326Right-handed alpha
Helix 44
AE8
B
349 360Right-handed alpha
Helix 45
AE9
B
378 389Right-handed alpha
Helix 46
AF1
B
391 400Right-handed alpha
Helix 47
AF2
B
403 410Right-handed alpha
Helix 48
AF3
B
419 439Right-handed alpha
Helix 49
AF4
B
444 455Right-handed alpha
Helix 50
AF5
B
458 495Right-handed alpha
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There are 8 sheets in PDB entry 6ICV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 101first strand
Strand 2
A
105 110anti-parallel
Strand 3
A
308 311anti-parallel
Strand 4
A
278 279parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 124first strand
Strand 2
A
294 298anti-parallel
Strand 3
A
286 289anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
266 270anti-parallel
Strand 3
A
256 259anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 342first strand
Strand 2
A
365 371anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 101first strand
Strand 2
B
105 110anti-parallel
Strand 3
B
308 311anti-parallel
Strand 4
B
278 279parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
119 124first strand
Strand 2
B
294 298anti-parallel
Strand 3
B
286 289anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
129 130first strand
Strand 2
B
266 270anti-parallel
Strand 3
B
256 259anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
336 342first strand
Strand 2
B
365 371anti-parallel
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