Analysis of interatomic Contacts of Structural Units in PDB entry:
6IEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IEH entry

There are 2 chains in PDB entry 6IEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ARG 98LEU 1042
A
 SER 162ASP 258
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 46 helices in PDB entry 6IEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
141 153Right-handed alpha
Helix 2
AA2
B
167 181Right-handed alpha
Helix 3
AA3
B
191 206Right-handed alpha
Helix 4
AA4
B
229 239Right-handed alpha
Helix 5
AA5
B
240 244Right-handed 310
Helix 6
AA6
B
253 259Right-handed 310
Helix 7
AA7
B
262 273Right-handed alpha
Helix 8
AA8
B
288 301Right-handed alpha
Helix 9
AA9
B
339 352Right-handed alpha
Helix 10
AB1
B
373 384Right-handed alpha
Helix 11
AB2
B
395 406Right-handed alpha
Helix 12
AB3
B
407 409Right-handed 310
Helix 13
AB4
B
413 429Right-handed alpha
Helix 14
AB5
B
432 437Right-handed alpha
Helix 15
AB6
B
438 443Right-handed alpha
Helix 16
AB7
B
444 450Right-handed alpha
Helix 17
AB8
B
460 474Right-handed alpha
Helix 18
AB9
B
484 486Right-handed 310
Helix 19
AC1
B
513 522Right-handed alpha
Helix 20
AC2
B
544 554Right-handed alpha
Helix 21
AC3
B
566 576Right-handed alpha
Helix 22
AC4
B
580 587Right-handed alpha
Helix 23
AC5
B
588 597Right-handed alpha
Helix 24
AC6
B
597 615Right-handed alpha
Helix 25
AC7
B
622 645Right-handed alpha
Helix 26
AC8
B
646 651Right-handed alpha
Helix 27
AC9
B
652 654Right-handed 310
Helix 28
AD1
B
703 708Right-handed alpha
Helix 29
AD2
B
752 770Right-handed alpha
Helix 30
AD3
B
787 807Right-handed alpha
Helix 31
AD4
B
807 812Right-handed alpha
Helix 32
AD5
B
814 841Right-handed alpha
Helix 33
AD6
B
847 861Right-handed alpha
Helix 34
AD7
B
871 880Right-handed alpha
Helix 35
AD8
B
884 894Right-handed alpha
Helix 36
AD9
B
895 900Right-handed 310
Helix 37
AE1
B
901 914Right-handed alpha
Helix 38
AE2
B
925 949Right-handed alpha
Helix 39
AE3
B
954 960Right-handed alpha
Helix 40
AE4
B
966 975Right-handed alpha
Helix 41
AE5
B
978 986Right-handed alpha
Helix 42
AE6
B
989 1014Right-handed alpha
Helix 43
AE7
B
1016 1031Right-handed alpha
Helix 44
AE8
B
1032 1037Right-handed 310
Helix 45
AE9
A
171 177Right-handed alpha
Helix 46
AF1
A
217 226Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 6IEH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
99 104first strand
Strand 2
B
110 117anti-parallel
Strand 3
B
304 309anti-parallel
Strand 4
B
156 160parallel
Strand 5
B
278 283parallel
Strand 6
B
246 251parallel
Strand 7
B
184 189parallel
Strand 8
B
224 228parallel
Strand 9
B
209 212parallel
Strand 10
B
217 218anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 455first strand
Strand 2
B
478 482parallel
Strand 3
B
389 393parallel
Strand 4
B
495 498parallel
Strand 5
B
533 539parallel
Strand 6
B
316 322parallel
Strand 7
B
327 332anti-parallel
Strand 8
A
253 255anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
502 504first strand
Strand 2
B
509 511anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
725 732first strand
Strand 2
B
693 702anti-parallel
Strand 3
B
667 680anti-parallel
Strand 4
B
658 664anti-parallel
Strand 5
B
736 743anti-parallel
Strand 6
A
164 165anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il