Analysis of interatomic Contacts of Structural Units in PDB entry:
6IY6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6IY6 entry

There are 12 chains in PDB entry 6IY6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 23ASP 495
B
ASP 23ASP 495
C
GLY 117LYS 320
D
GLY 117LYS 320
E
THR 3GLU 159
F
THR 3GLU 159
G
ASP 23ASP 495
H
ASP 23ASP 495
I
GLY 117LYS 320
J
GLY 117LYS 320
K
THR 3GLU 159
L
THR 3GLU 159
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are124 helices in PDB entry 6IY6. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
47 51Right-handed 310
Helix 2
AA2
A
52 56Right-handed 310
Helix 3
AA3
A
98 108Right-handed alpha
Helix 4
AA4
A
180 187Right-handed alpha
Helix 5
AA5
A
189 213Right-handed alpha
Helix 6
AA6
A
250 259Right-handed alpha
Helix 7
AA7
A
299 321Right-handed alpha
Helix 8
AA8
A
321 330Right-handed alpha
Helix 9
AA9
A
348 358Right-handed alpha
Helix 10
AB1
A
369 384Right-handed alpha
Helix 11
AB2
A
395 399Right-handed 310
Helix 12
AB3
A
434 445Right-handed alpha
Helix 13
AB4
A
448 451Right-handed 310
Helix 14
AB5
A
452 458Right-handed alpha
Helix 15
AB6
A
473 482Right-handed alpha
Helix 16
AB7
A
485 490Right-handed 310
Helix 17
AB8
B
47 51Right-handed 310
Helix 18
AB9
B
52 56Right-handed 310
Helix 19
AC1
B
98 108Right-handed alpha
Helix 20
AC2
B
180 187Right-handed alpha
Helix 21
AC3
B
189 213Right-handed alpha
Helix 22
AC4
B
250 259Right-handed alpha
Helix 23
AC5
B
299 321Right-handed alpha
Helix 24
AC6
B
321 330Right-handed alpha
Helix 25
AC7
B
348 358Right-handed alpha
Helix 26
AC8
B
369 384Right-handed alpha
Helix 27
AC9
B
395 399Right-handed 310
Helix 28
AD1
B
434 445Right-handed alpha
Helix 29
AD2
B
448 451Right-handed 310
Helix 30
AD3
B
452 458Right-handed alpha
Helix 31
AD4
B
473 482Right-handed alpha
Helix 32
AD5
B
485 490Right-handed 310
Helix 33
AD6
C
132 144Right-handed alpha
Helix 34
AD7
C
162 167Right-handed alpha
Helix 35
AD8
C
209 219Right-handed alpha
Helix 36
AD9
C
226 243Right-handed alpha
Helix 37
AE1
C
248 266Right-handed alpha
Helix 38
AE2
C
275 286Right-handed alpha
Helix 39
AE3
C
296 309Right-handed alpha
Helix 40
AE4
C
309 318Right-handed alpha
Helix 41
AE5
D
132 144Right-handed alpha
Helix 42
AE6
D
162 167Right-handed alpha
Helix 43
AE7
D
209 219Right-handed alpha
Helix 44
AE8
D
226 243Right-handed alpha
Helix 45
AE9
D
248 266Right-handed alpha
Helix 46
AF1
D
275 286Right-handed alpha
Helix 47
AF2
D
296 309Right-handed alpha
Helix 48
AF3
D
309 318Right-handed alpha
Helix 49
AF4
E
14 25Right-handed alpha
Helix 50
AF5
E
50 62Right-handed alpha
Helix 51
AF6
E
71 88Right-handed alpha
Helix 52
AF7
E
94 106Right-handed alpha
Helix 53
AF8
E
118 131Right-handed alpha
Helix 54
AF9
E
131 140Right-handed alpha
Helix 55
AG1
E
144 158Right-handed alpha
Helix 56
AG2
F
14 25Right-handed alpha
Helix 57
AG3
F
50 62Right-handed alpha
Helix 58
AG4
F
71 88Right-handed alpha
Helix 59
AG5
F
94 106Right-handed alpha
Helix 60
AG6
F
118 131Right-handed alpha
Helix 61
AG7
F
131 140Right-handed alpha
Helix 62
AG8
F
144 158Right-handed alpha
Helix 63
AG9
G
47 51Right-handed 310
Helix 64
AH1
G
52 56Right-handed 310
Helix 65
AH2
G
98 108Right-handed alpha
Helix 66
AH3
G
180 187Right-handed alpha
Helix 67
AH4
G
189 213Right-handed alpha
Helix 68
AH5
G
250 259Right-handed alpha
Helix 69
AH6
G
299 321Right-handed alpha
Helix 70
AH7
G
321 330Right-handed alpha
Helix 71
AH8
G
348 358Right-handed alpha
Helix 72
AH9
G
369 384Right-handed alpha
Helix 73
AI1
G
395 399Right-handed 310
Helix 74
AI2
G
434 445Right-handed alpha
Helix 75
AI3
G
448 451Right-handed 310
Helix 76
AI4
G
452 458Right-handed alpha
Helix 77
AI5
G
473 482Right-handed alpha
Helix 78
AI6
G
485 490Right-handed 310
Helix 79
AI7
H
47 51Right-handed 310
Helix 80
AI8
H
52 56Right-handed 310
Helix 81
AI9
H
98 108Right-handed alpha
Helix 82
AJ1
H
180 187Right-handed alpha
Helix 83
AJ2
H
189 213Right-handed alpha
Helix 84
AJ3
H
250 259Right-handed alpha
Helix 85
AJ4
H
299 321Right-handed alpha
Helix 86
AJ5
H
321 330Right-handed alpha
Helix 87
AJ6
H
348 358Right-handed alpha
Helix 88
AJ7
H
369 384Right-handed alpha
Helix 89
AJ8
H
395 399Right-handed 310
Helix 90
AJ9
H
434 445Right-handed alpha
Helix 91
AK1
H
448 451Right-handed 310
Helix 92
AK2
H
452 458Right-handed alpha
Helix 93
AK3
H
473 482Right-handed alpha
Helix 94
AK4
H
485 490Right-handed 310
Helix 95
AK5
I
132 144Right-handed alpha
Helix 96
AK6
I
162 167Right-handed alpha
Helix 97
AK7
I
209 219Right-handed alpha
Helix 98
AK8
I
226 243Right-handed alpha
Helix 99
AK9
I
248 266Right-handed alpha
Helix 100
AL1
I
275 286Right-handed alpha
Helix 101
AL2
I
296 309Right-handed alpha
Helix 102
AL3
I
309 318Right-handed alpha
Helix 103
AL4
J
132 144Right-handed alpha
Helix 104
AL5
J
162 167Right-handed alpha
Helix 105
AL6
J
209 219Right-handed alpha
Helix 106
AL7
J
226 243Right-handed alpha
Helix 107
AL8
J
248 266Right-handed alpha
Helix 108
AL9
J
275 286Right-handed alpha
Helix 109
AM1
J
296 309Right-handed alpha
Helix 110
AM2
J
309 318Right-handed alpha
Helix 111
AM3
K
14 23Right-handed alpha
Helix 112
AM4
K
50 62Right-handed alpha
Helix 113
AM5
K
71 88Right-handed alpha
Helix 114
AM6
K
94 106Right-handed alpha
Helix 115
AM7
K
118 131Right-handed alpha
Helix 116
AM8
K
131 140Right-handed alpha
Helix 117
AM9
K
144 158Right-handed alpha
Helix 118
AN1
L
14 23Right-handed alpha
Helix 119
AN2
L
50 62Right-handed alpha
Helix 120
AN3
L
71 88Right-handed alpha
Helix 121
AN4
L
94 106Right-handed alpha
Helix 122
AN5
L
118 131Right-handed alpha
Helix 123
AN6
L
131 140Right-handed alpha
Helix 124
AN7
L
144 158Right-handed alpha
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There are 16 sheets in PDB entry 6IY6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
29 31first strand
Strand 2
A
135 146parallel
Strand 3
A
113 122anti-parallel
Strand 4
A
59 72anti-parallel
Strand 5
A
75 82anti-parallel
Strand 6
A
85 92anti-parallel
Strand 7
A
135 146parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
216 217first strand
Strand 2
A
264 273parallel
Strand 3
A
284 294anti-parallel
Strand 4
A
466 472anti-parallel
Strand 5
A
423 431anti-parallel
Strand 6
A
415 420anti-parallel
Strand 7
A
388 392anti-parallel
Strand 8
A
344 347parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
29 31first strand
Strand 2
B
135 146parallel
Strand 3
B
113 122anti-parallel
Strand 4
B
59 72anti-parallel
Strand 5
B
75 82anti-parallel
Strand 6
B
85 92anti-parallel
Strand 7
B
135 146parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
216 217first strand
Strand 2
B
264 272parallel
Strand 3
B
285 294anti-parallel
Strand 4
B
466 472anti-parallel
Strand 5
B
423 431anti-parallel
Strand 6
B
415 420anti-parallel
Strand 7
B
388 392anti-parallel
Strand 8
B
344 347parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
148 154first strand
Strand 2
C
183 189parallel
Strand 3
C
121 126parallel
Strand 4
C
196 198anti-parallel
Strand 5
C
207 208anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
148 154first strand
Strand 2
D
183 189parallel
Strand 3
D
121 126parallel
Strand 4
D
196 198anti-parallel
Strand 5
D
207 208anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
30 35first strand
Strand 2
E
4 9parallel
Strand 3
E
39 41anti-parallel
Strand 4
E
47 48anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
30 35first strand
Strand 2
F
4 9parallel
Strand 3
F
39 41anti-parallel
Strand 4
F
47 48anti-parallel
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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
29 31first strand
Strand 2
G
135 146parallel
Strand 3
G
113 122anti-parallel
Strand 4
G
59 72anti-parallel
Strand 5
G
75 82anti-parallel
Strand 6
G
85 92anti-parallel
Strand 7
G
135 146parallel
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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
216 217first strand
Strand 2
G
264 271parallel
Strand 3
G
286 294anti-parallel
Strand 4
G
466 472anti-parallel
Strand 5
G
423 431anti-parallel
Strand 6
G
415 420anti-parallel
Strand 7
G
388 392anti-parallel
Strand 8
G
344 347parallel
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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
29 31first strand
Strand 2
H
135 146parallel
Strand 3
H
113 122anti-parallel
Strand 4
H
59 72anti-parallel
Strand 5
H
75 82anti-parallel
Strand 6
H
85 92anti-parallel
Strand 7
H
135 146parallel
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There are 8 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
216 217first strand
Strand 2
H
264 271parallel
Strand 3
H
286 294anti-parallel
Strand 4
H
466 472anti-parallel
Strand 5
H
423 431anti-parallel
Strand 6
H
415 420anti-parallel
Strand 7
H
388 392anti-parallel
Strand 8
H
344 347parallel
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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
148 154first strand
Strand 2
I
183 189parallel
Strand 3
I
121 126parallel
Strand 4
I
196 198anti-parallel
Strand 5
I
207 208anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
148 154first strand
Strand 2
J
183 189parallel
Strand 3
J
121 126parallel
Strand 4
J
196 198anti-parallel
Strand 5
J
207 208anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
30 35first strand
Strand 2
K
4 9parallel
Strand 3
K
39 41anti-parallel
Strand 4
K
47 48anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
30 35first strand
Strand 2
L
4 9parallel
Strand 3
L
39 41anti-parallel
Strand 4
L
47 48anti-parallel
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