Analysis of interatomic Contacts of Structural Units in PDB entry:
6K71

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K71 entry

There are 13 chains in PDB entry 6K71 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 4	LEU 305
B	LYS 4	LEU 305
C	GLY 8	LEU 351
D	GLY 8	LEU 351
E	MET 1	VAL 444
F	MET 1	VAL 444
G	GLN 166	ASP 522
H	GLN 166	ASP 522
I	PRO 41	SER 466
J	PRO 41	GLU 715
K	ARG 7	VAL 271
M	ASP 173	ARG 188
P	ALA 40	ARG 460

There are135 helices in PDB entry 6K71. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	7	17	Right-handed alpha
Helix 2	AA2	A	21	33	Right-handed alpha
Helix 3	AA3	A	34	36	Right-handed 310
Helix 4	AA4	A	46	58	Right-handed alpha
Helix 5	AA5	A	63	77	Right-handed alpha
Helix 6	AA6	A	92	106	Right-handed alpha
Helix 7	AA7	A	106	115	Right-handed alpha
Helix 8	AA8	A	131	143	Right-handed alpha
Helix 9	AA9	A	161	170	Right-handed alpha
Helix 10	AB1	A	182	187	Right-handed alpha
Helix 11	AB2	A	188	190	Right-handed 310
Helix 12	AB3	A	212	223	Right-handed alpha
Helix 13	AB4	A	242	246	Right-handed 310
Helix 14	AB5	A	294	303	Right-handed alpha
Helix 15	AB6	B	5	17	Right-handed alpha
Helix 16	AB7	B	21	32	Right-handed alpha
Helix 17	AB8	B	33	36	Right-handed 310
Helix 18	AB9	B	46	58	Right-handed alpha
Helix 19	AC1	B	62	76	Right-handed alpha
Helix 20	AC2	B	92	116	Right-handed alpha
Helix 21	AC3	B	131	141	Right-handed alpha
Helix 22	AC4	B	161	170	Right-handed alpha
Helix 23	AC5	B	179	183	Right-handed 310
Helix 24	AC6	B	186	190	Right-handed 310
Helix 25	AC7	B	212	221	Right-handed alpha
Helix 26	AC8	B	247	252	Right-handed alpha
Helix 27	AC9	B	295	301	Right-handed alpha
Helix 28	AD1	C	11	24	Right-handed alpha
Helix 29	AD2	C	31	43	Right-handed alpha
Helix 30	AD3	C	53	72	Right-handed alpha
Helix 31	AD4	C	76	98	Right-handed alpha
Helix 32	AD5	C	128	154	Right-handed alpha
Helix 33	AD6	C	155	158	Right-handed 310
Helix 34	AD7	C	171	185	Right-handed alpha
Helix 35	AD8	C	200	207	Right-handed alpha
Helix 36	AD9	C	221	228	Right-handed 310
Helix 37	AE1	C	250	258	Right-handed alpha
Helix 38	AE2	C	336	344	Right-handed alpha
Helix 39	AE3	C	345	350	Right-handed 310
Helix 40	AE4	D	11	22	Right-handed alpha
Helix 41	AE5	D	31	41	Right-handed alpha
Helix 42	AE6	D	53	72	Right-handed alpha
Helix 43	AE7	D	78	98	Right-handed alpha
Helix 44	AE8	D	128	154	Right-handed alpha
Helix 45	AE9	D	171	185	Right-handed alpha
Helix 46	AF1	D	200	207	Right-handed alpha
Helix 47	AF2	D	218	222	Right-handed 310
Helix 48	AF3	D	250	259	Right-handed alpha
Helix 49	AF4	D	290	294	Right-handed 310
Helix 50	AF5	D	317	321	Right-handed 310
Helix 51	AF6	D	336	343	Right-handed alpha
Helix 52	AF7	D	345	349	Right-handed 310
Helix 53	AF8	E	36	43	Right-handed alpha
Helix 54	AF9	E	62	66	Right-handed 310
Helix 55	AG1	E	85	93	Right-handed alpha
Helix 56	AG2	E	119	123	Right-handed 310
Helix 57	AG3	E	172	176	Right-handed 310
Helix 58	AG4	E	183	190	Right-handed alpha
Helix 59	AG5	E	208	217	Right-handed alpha
Helix 60	AG6	E	225	229	Right-handed 310
Helix 61	AG7	F	37	41	Right-handed 310
Helix 62	AG8	F	62	66	Right-handed 310
Helix 63	AG9	F	85	91	Right-handed alpha
Helix 64	AH1	F	116	120	Right-handed 310
Helix 65	AH2	F	184	190	Right-handed alpha
Helix 66	AH3	F	208	216	Right-handed alpha
Helix 67	AH4	G	191	195	Right-handed 310
Helix 68	AH5	G	204	215	Right-handed alpha
Helix 69	AH6	G	223	238	Right-handed alpha
Helix 70	AH7	G	251	256	Right-handed alpha
Helix 71	AH8	G	256	267	Right-handed alpha
Helix 72	AH9	G	270	287	Right-handed alpha
Helix 73	AI1	G	292	327	Right-handed alpha
Helix 74	AI2	G	341	351	Right-handed alpha
Helix 75	AI3	G	369	379	Right-handed alpha
Helix 76	AI4	G	389	394	Right-handed 310
Helix 77	AI5	G	421	427	Right-handed alpha
Helix 78	AI6	G	439	443	Right-handed 310
Helix 79	AI7	G	512	517	Right-handed alpha
Helix 80	AI8	H	191	195	Right-handed 310
Helix 81	AI9	H	204	215	Right-handed alpha
Helix 82	AJ1	H	223	238	Right-handed alpha
Helix 83	AJ2	H	252	267	Right-handed alpha
Helix 84	AJ3	H	270	287	Right-handed alpha
Helix 85	AJ4	H	292	327	Right-handed alpha
Helix 86	AJ5	H	341	351	Right-handed alpha
Helix 87	AJ6	H	369	379	Right-handed alpha
Helix 88	AJ7	H	387	391	Right-handed 310
Helix 89	AJ8	H	421	429	Right-handed alpha
Helix 90	AJ9	H	512	518	Right-handed alpha
Helix 91	AK1	I	64	68	Right-handed 310
Helix 92	AK2	I	74	86	Right-handed alpha
Helix 93	AK3	I	98	107	Right-handed alpha
Helix 94	AK4	I	132	142	Right-handed alpha
Helix 95	AK5	I	161	176	Right-handed alpha
Helix 96	AK6	I	254	260	Right-handed alpha
Helix 97	AK7	I	269	275	Right-handed alpha
Helix 98	AK8	I	276	278	Right-handed 310
Helix 99	AK9	I	302	314	Right-handed alpha
Helix 100	AL1	I	338	342	Right-handed 310
Helix 101	AL2	J	74	86	Right-handed alpha
Helix 102	AL3	J	98	106	Right-handed alpha
Helix 103	AL4	J	130	139	Right-handed alpha
Helix 104	AL5	J	161	175	Right-handed alpha
Helix 105	AL6	J	227	231	Right-handed 310
Helix 106	AL7	J	254	262	Right-handed alpha
Helix 107	AL8	J	268	277	Right-handed alpha
Helix 108	AL9	J	302	311	Right-handed alpha
Helix 109	AM1	J	548	552	Right-handed alpha
Helix 110	AM2	J	552	561	Right-handed alpha
Helix 111	AM3	J	562	565	Right-handed 310
Helix 112	AM4	J	571	584	Right-handed alpha
Helix 113	AM5	J	588	602	Right-handed alpha
Helix 114	AM6	J	614	622	Right-handed alpha
Helix 115	AM7	J	622	627	Right-handed alpha
Helix 116	AM8	J	638	656	Right-handed alpha
Helix 117	AM9	J	657	664	Right-handed 310
Helix 118	AN1	J	666	670	Right-handed 310
Helix 119	AN2	J	677	685	Right-handed alpha
Helix 120	AN3	J	693	699	Right-handed alpha
Helix 121	AN4	J	700	714	Right-handed alpha
Helix 122	AN5	K	96	114	Right-handed alpha
Helix 123	AN6	K	126	132	Right-handed alpha
Helix 124	AN7	K	133	135	Right-handed 310
Helix 125	AN8	K	143	156	Right-handed alpha
Helix 126	AN9	K	172	178	Right-handed alpha
Helix 127	AO1	K	178	183	Right-handed alpha
Helix 128	AO2	K	202	221	Right-handed alpha
Helix 129	AO3	K	245	261	Right-handed alpha
Helix 130	AO4	M	174	187	Right-handed alpha
Helix 131	AO5	P	53	63	Right-handed alpha
Helix 132	AO6	P	142	149	Right-handed alpha
Helix 133	AO7	P	168	174	Right-handed alpha
Helix 134	AO8	P	196	209	Right-handed alpha
Helix 135	AO9	P	231	241	Right-handed alpha

There are 45 sheets in PDB entry 6K71. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	124	127	first strand
Strand 2	A	149	152	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	201	first strand
Strand 2	A	205	209	anti-parallel
Strand 3	A	273	274	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	285	first strand
Strand 2	A	290	291	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	151	152	first strand
Strand 2	B	125	127	parallel
Strand 3	B	192	196	parallel
Strand 4	B	226	229	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	206	207	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	285	first strand
Strand 2	B	290	291	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	168	first strand
Strand 2	C	188	192	parallel
Strand 3	C	214	216	parallel
Strand 4	G	483	484	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	313	316	first strand
Strand 2	C	245	248	anti-parallel
Strand 3	C	234	239	anti-parallel
Strand 4	C	266	268	parallel
Strand 5	C	323	326	parallel
Strand 6	C	329	331	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	308	first strand
Strand 2	G	383	387	parallel
Strand 3	G	358	362	parallel
Strand 4	G	333	336	parallel
Strand 5	G	400	403	parallel
Strand 6	G	434	437	parallel
Strand 7	G	499	501	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	215	216	first strand
Strand 2	D	188	192	parallel
Strand 3	D	164	168	parallel
Strand 4	D	232	235	parallel
Strand 5	D	265	268	parallel
Strand 6	D	323	325	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	238	239	first strand
Strand 2	D	245	246	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	52	first strand
Strand 2	E	4	6	parallel
Strand 3	E	101	103	parallel
Strand 4	E	205	207	anti-parallel
Strand 5	E	128	129	anti-parallel
Strand 6	E	263	264	parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	170	171	first strand
Strand 2	E	157	160	anti-parallel
Strand 3	E	194	196	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	182	first strand
Strand 2	J	224	225	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	357	358	first strand
Strand 2	E	374	375	parallel
Strand 3	E	391	392	parallel
Strand 4	E	408	409	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	52	53	first strand
Strand 2	F	6	7	parallel
Strand 3	F	103	104	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	133	first strand
Strand 2	F	200	201	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	159	160	first strand
Strand 2	F	193	195	anti-parallel
Strand 3	I	238	241	anti-parallel
Strand 4	I	203	206	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	183	first strand
Strand 2	I	223	225	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	363	364	first strand
Strand 2	F	380	381	parallel
Strand 3	F	397	398	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	402	404	first strand
Strand 2	F	419	421	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	414	417	first strand
Strand 2	G	489	492	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	333	334	first strand
Strand 2	H	400	401	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	358	360	first strand
Strand 2	H	383	385	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	407	408	first strand
Strand 2	H	414	416	anti-parallel
Strand 3	H	490	492	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	436	437	first strand
Strand 2	H	499	502	parallel
Strand 3	H	505	508	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	46	48	first strand
Strand 2	I	150	152	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	94	95	first strand
Strand 2	I	123	124	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	179	185	first strand
Strand 2	I	286	291	parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	390	392	first strand
Strand 2	I	407	409	parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	431	432	first strand
Strand 2	I	449	450	parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	119	121	first strand
Strand 2	J	90	93	parallel
Strand 3	J	44	48	parallel
Strand 4	J	148	152	parallel
Strand 5	J	251	252	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	155	157	first strand
Strand 2	J	297	299	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	179	184	first strand
Strand 2	J	286	290	parallel

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There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	212	214	first strand
Strand 2	J	203	205	anti-parallel
Strand 3	J	239	241	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	336	337	first strand
Strand 2	J	343	344	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	355	356	first strand
Strand 2	J	373	374	parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	389	390	first strand
Strand 2	J	406	407	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	411	412	first strand
Strand 2	J	429	430	parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	22	23	first strand
Strand 2	K	68	69	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	44	45	first strand
Strand 2	P	154	155	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	159	160	first strand
Strand 2	P	189	190	parallel

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There are 3 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	277	278	first strand
Strand 2	P	339	341	anti-parallel
Strand 3	P	318	321	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	419	420	first strand
Strand 2	P	424	426	anti-parallel
Strand 3	P	372	376	anti-parallel
Strand 4	P	456	459	anti-parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	414	415	first strand
Strand 2	P	404	407	anti-parallel
Strand 3	P	442	446	anti-parallel
Strand 4	P	451	453	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K71

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K71