Analysis of interatomic Contacts of Structural Units in PDB entry:
6K72

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6K72 entry

There are 14 chains in PDB entry 6K72 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 4	LEU 305
B	GLU 5	LEU 305
C	GLY 8	LEU 351
D	GLY 8	LEU 351
E	MET 1	VAL 444
F	MET 1	VAL 444
G	GLN 166	ASP 522
H	GLN 166	ASP 522
I	PRO 41	SER 466
J	PRO 41	SER 466
K	ARG 7	VAL 271
L	ARG 7	GLN 187
M	ASP 173	ARG 188
P	ALA 40	ARG 460

There are131 helices in PDB entry 6K72. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	15	Right-handed alpha
Helix 2	AA2	A	21	34	Right-handed alpha
Helix 3	AA3	A	42	58	Right-handed alpha
Helix 4	AA4	A	63	75	Right-handed alpha
Helix 5	AA5	A	94	116	Right-handed alpha
Helix 6	AA6	A	133	144	Right-handed alpha
Helix 7	AA7	A	160	169	Right-handed alpha
Helix 8	AA8	A	170	172	Right-handed 310
Helix 9	AA9	A	182	190	Right-handed alpha
Helix 10	AB1	A	212	222	Right-handed alpha
Helix 11	AB2	A	231	235	Right-handed 310
Helix 12	AB3	A	242	246	Right-handed 310
Helix 13	AB4	A	247	251	Right-handed 310
Helix 14	AB5	A	294	302	Right-handed alpha
Helix 15	AB6	B	6	16	Right-handed alpha
Helix 16	AB7	B	21	33	Right-handed alpha
Helix 17	AB8	B	42	57	Right-handed alpha
Helix 18	AB9	B	63	77	Right-handed alpha
Helix 19	AC1	B	94	116	Right-handed alpha
Helix 20	AC2	B	133	143	Right-handed alpha
Helix 21	AC3	B	160	171	Right-handed alpha
Helix 22	AC4	B	182	187	Right-handed alpha
Helix 23	AC5	B	211	223	Right-handed alpha
Helix 24	AC6	B	247	251	Right-handed 310
Helix 25	AC7	B	295	303	Right-handed alpha
Helix 26	AC8	C	9	24	Right-handed alpha
Helix 27	AC9	C	30	46	Right-handed alpha
Helix 28	AD1	C	53	72	Right-handed alpha
Helix 29	AD2	C	76	98	Right-handed alpha
Helix 30	AD3	C	128	145	Right-handed alpha
Helix 31	AD4	C	146	154	Right-handed alpha
Helix 32	AD5	C	171	182	Right-handed alpha
Helix 33	AD6	C	199	208	Right-handed alpha
Helix 34	AD7	C	209	211	Right-handed 310
Helix 35	AD8	C	221	226	Right-handed alpha
Helix 36	AD9	C	250	260	Right-handed alpha
Helix 37	AE1	C	290	294	Right-handed 310
Helix 38	AE2	C	302	304	Right-handed 310
Helix 39	AE3	C	335	344	Right-handed alpha
Helix 40	AE4	D	9	23	Right-handed alpha
Helix 41	AE5	D	30	45	Right-handed alpha
Helix 42	AE6	D	54	72	Right-handed alpha
Helix 43	AE7	D	76	95	Right-handed alpha
Helix 44	AE8	D	128	146	Right-handed alpha
Helix 45	AE9	D	146	156	Right-handed alpha
Helix 46	AF1	D	171	182	Right-handed alpha
Helix 47	AF2	D	199	207	Right-handed alpha
Helix 48	AF3	D	221	226	Right-handed alpha
Helix 49	AF4	D	250	261	Right-handed alpha
Helix 50	AF5	D	290	294	Right-handed 310
Helix 51	AF6	D	300	304	Right-handed 310
Helix 52	AF7	D	336	342	Right-handed alpha
Helix 53	AF8	E	36	45	Right-handed alpha
Helix 54	AF9	E	67	71	Right-handed 310
Helix 55	AG1	E	87	94	Right-handed alpha
Helix 56	AG2	E	114	124	Right-handed alpha
Helix 57	AG3	E	183	189	Right-handed alpha
Helix 58	AG4	E	208	218	Right-handed alpha
Helix 59	AG5	E	223	227	Right-handed 310
Helix 60	AG6	E	283	288	Right-handed alpha
Helix 61	AG7	F	38	45	Right-handed alpha
Helix 62	AG8	F	61	66	Right-handed 310
Helix 63	AG9	F	86	94	Right-handed alpha
Helix 64	AH1	F	114	124	Right-handed alpha
Helix 65	AH2	F	183	190	Right-handed alpha
Helix 66	AH3	F	208	218	Right-handed alpha
Helix 67	AH4	F	283	288	Right-handed 310
Helix 68	AH5	G	177	181	Right-handed 310
Helix 69	AH6	G	204	214	Right-handed alpha
Helix 70	AH7	G	221	240	Right-handed alpha
Helix 71	AH8	G	247	267	Right-handed alpha
Helix 72	AH9	G	270	285	Right-handed alpha
Helix 73	AI1	G	292	324	Right-handed alpha
Helix 74	AI2	G	325	327	Right-handed 310
Helix 75	AI3	G	340	351	Right-handed alpha
Helix 76	AI4	G	369	380	Right-handed alpha
Helix 77	AI5	G	390	395	Right-handed alpha
Helix 78	AI6	G	419	429	Right-handed alpha
Helix 79	AI7	G	459	463	Right-handed 310
Helix 80	AI8	G	510	518	Right-handed 310
Helix 81	AI9	H	204	217	Right-handed alpha
Helix 82	AJ1	H	221	240	Right-handed alpha
Helix 83	AJ2	H	248	267	Right-handed alpha
Helix 84	AJ3	H	271	287	Right-handed alpha
Helix 85	AJ4	H	292	324	Right-handed alpha
Helix 86	AJ5	H	339	351	Right-handed alpha
Helix 87	AJ6	H	369	379	Right-handed alpha
Helix 88	AJ7	H	389	391	Right-handed 310
Helix 89	AJ8	H	419	429	Right-handed alpha
Helix 90	AJ9	H	511	518	Right-handed 310
Helix 91	AK1	I	74	86	Right-handed alpha
Helix 92	AK2	I	98	109	Right-handed alpha
Helix 93	AK3	I	110	113	Right-handed 310
Helix 94	AK4	I	132	141	Right-handed alpha
Helix 95	AK5	I	161	175	Right-handed alpha
Helix 96	AK6	I	254	263	Right-handed alpha
Helix 97	AK7	I	268	277	Right-handed alpha
Helix 98	AK8	I	302	313	Right-handed alpha
Helix 99	AK9	I	314	316	Right-handed 310
Helix 100	AL1	I	330	334	Right-handed 310
Helix 101	AL2	I	338	340	Right-handed 310
Helix 102	AL3	J	64	68	Right-handed 310
Helix 103	AL4	J	74	87	Right-handed alpha
Helix 104	AL5	J	98	106	Right-handed alpha
Helix 105	AL6	J	131	142	Right-handed alpha
Helix 106	AL7	J	160	163	Right-handed 310
Helix 107	AL8	J	164	175	Right-handed alpha
Helix 108	AL9	J	253	263	Right-handed alpha
Helix 109	AM1	J	269	277	Right-handed alpha
Helix 110	AM2	J	303	315	Right-handed alpha
Helix 111	AM3	J	338	342	Right-handed 310
Helix 112	AM4	K	36	40	Right-handed 310
Helix 113	AM5	K	94	114	Right-handed alpha
Helix 114	AM6	K	125	133	Right-handed alpha
Helix 115	AM7	K	137	142	Right-handed alpha
Helix 116	AM8	K	147	159	Right-handed alpha
Helix 117	AM9	K	161	166	Right-handed 310
Helix 118	AN1	K	169	173	Right-handed 310
Helix 119	AN2	K	201	223	Right-handed alpha
Helix 120	AN3	K	246	261	Right-handed alpha
Helix 121	AN4	L	95	107	Right-handed alpha
Helix 122	AN5	L	143	153	Right-handed alpha
Helix 123	AN6	L	175	180	Right-handed alpha
Helix 124	AN7	M	174	183	Right-handed alpha
Helix 125	AN8	M	184	186	Right-handed 310
Helix 126	AN9	P	55	62	Right-handed alpha
Helix 127	AO1	P	141	148	Right-handed alpha
Helix 128	AO2	P	196	200	Right-handed 310
Helix 129	AO3	P	202	211	Right-handed alpha
Helix 130	AO4	P	231	236	Right-handed alpha
Helix 131	AO5	P	344	349	Right-handed 310

There are 53 sheets in PDB entry 6K72. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	127	first strand
Strand 2	A	150	153	parallel
Strand 3	A	176	178	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	195	first strand
Strand 2	A	226	229	parallel
Strand 3	A	283	285	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	199	200	first strand
Strand 2	A	206	208	anti-parallel
Strand 3	A	274	275	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	175	178	first strand
Strand 2	B	150	153	parallel
Strand 3	B	125	127	parallel
Strand 4	B	192	196	parallel
Strand 5	B	226	229	parallel
Strand 6	B	283	286	parallel
Strand 7	B	289	291	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	199	200	first strand
Strand 2	B	206	208	anti-parallel
Strand 3	B	274	275	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	164	168	first strand
Strand 2	C	188	192	parallel
Strand 3	C	214	217	parallel
Strand 4	G	482	484	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	232	234	first strand
Strand 2	C	265	267	parallel
Strand 3	C	323	324	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	238	239	first strand
Strand 2	C	245	248	anti-parallel
Strand 3	C	313	316	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	306	308	first strand
Strand 2	G	383	387	parallel
Strand 3	G	355	362	parallel
Strand 4	G	329	335	parallel
Strand 5	G	400	401	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	165	168	first strand
Strand 2	D	189	192	parallel
Strand 3	D	215	217	parallel
Strand 4	H	483	485	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	232	234	first strand
Strand 2	D	265	267	parallel
Strand 3	D	323	324	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	246	first strand
Strand 2	D	238	240	anti-parallel
Strand 3	D	274	275	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	54	first strand
Strand 2	E	77	78	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	101	103	first strand
Strand 2	E	205	207	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	158	161	first strand
Strand 2	E	192	196	anti-parallel
Strand 3	J	238	241	anti-parallel
Strand 4	J	201	205	anti-parallel
Strand 5	J	212	217	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	181	182	first strand
Strand 2	J	224	225	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	397	398	first strand
Strand 2	E	414	415	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	6	7	first strand
Strand 2	F	101	104	parallel
Strand 3	F	205	207	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	54	first strand
Strand 2	F	77	78	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	132	133	first strand
Strand 2	F	200	201	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	167	171	first strand
Strand 2	F	157	160	anti-parallel
Strand 3	F	192	196	anti-parallel
Strand 4	I	238	241	anti-parallel
Strand 5	I	203	206	anti-parallel
Strand 6	I	212	214	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	181	182	first strand
Strand 2	I	224	225	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	391	392	first strand
Strand 2	F	408	409	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	396	397	first strand
Strand 2	F	413	414	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	419	420	first strand
Strand 2	F	435	436	parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	407	408	first strand
Strand 2	G	414	417	anti-parallel
Strand 3	G	489	490	anti-parallel

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There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	435	437	first strand
Strand 2	G	499	502	parallel
Strand 3	G	505	508	anti-parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	333	335	first strand
Strand 2	H	358	362	parallel
Strand 3	H	385	387	parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	401	402	first strand
Strand 2	H	434	437	parallel
Strand 3	H	499	502	parallel
Strand 4	H	505	508	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	407	409	first strand
Strand 2	H	413	415	anti-parallel

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There are 7 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	119	123	first strand
Strand 2	I	90	95	parallel
Strand 3	I	45	49	parallel
Strand 4	I	148	152	parallel
Strand 5	I	251	252	anti-parallel
Strand 6	I	181	184	anti-parallel
Strand 7	I	288	290	parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	186	187	first strand
Strand 2	I	244	245	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	342	343	first strand
Strand 2	I	360	361	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	366	367	first strand
Strand 2	I	383	384	parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	378	379	first strand
Strand 2	I	395	396	parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	390	392	first strand
Strand 2	I	407	409	parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	430	431	first strand
Strand 2	I	448	449	parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	46	48	first strand
Strand 2	J	148	152	parallel
Strand 3	J	251	252	anti-parallel
Strand 4	J	179	184	anti-parallel
Strand 5	J	286	290	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	90	93	first strand
Strand 2	J	119	122	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	356	358	first strand
Strand 2	J	374	375	parallel
Strand 3	J	391	392	parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	366	367	first strand
Strand 2	J	383	384	parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	378	379	first strand
Strand 2	J	395	396	parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	418	419	first strand
Strand 2	J	436	437	parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	430	431	first strand
Strand 2	J	448	449	parallel

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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	33	35	first strand
Strand 2	K	19	26	anti-parallel
Strand 3	K	68	73	anti-parallel
Strand 4	K	85	86	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	191	194	first strand
Strand 2	K	236	239	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	26	27	first strand
Strand 2	L	32	33	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	72	73	first strand
Strand 2	L	85	86	anti-parallel

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There are 4 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	130	137	first strand
Strand 2	P	42	49	parallel
Strand 3	P	154	158	parallel
Strand 4	P	184	188	parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	256	257	first strand
Strand 2	P	357	358	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	278	282	first strand
Strand 2	P	336	340	anti-parallel
Strand 3	P	321	322	anti-parallel

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There are 2 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	371	373	first strand
Strand 2	P	425	427	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	P	411	414	first strand
Strand 2	P	405	408	anti-parallel
Strand 3	P	443	444	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6K72

Analysis of interatomic Contacts of Structural Units in PDB entry:
6K72