Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7J entry

There are 2 chains in PDB entry 6K7J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35LYS 1063
C
 ARG 27ARG 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 6K7J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 74Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 123Right-handed alpha
Helix 4
AA4
A
176 180Right-handed 310
Helix 5
AA5
A
208 213Right-handed alpha
Helix 6
AA6
A
270 273Right-handed 310
Helix 7
AA7
A
274 279Right-handed alpha
Helix 8
AA8
A
288 323Right-handed alpha
Helix 9
AA9
A
339 352Right-handed alpha
Helix 10
AB1
A
353 355Right-handed 310
Helix 11
AB2
A
358 377Right-handed alpha
Helix 12
AB3
A
393 397Right-handed 310
Helix 13
AB4
A
398 401Right-handed 310
Helix 14
AB5
A
450 455Right-handed alpha
Helix 15
AB6
A
458 472Right-handed alpha
Helix 16
AB7
A
490 500Right-handed alpha
Helix 17
AB8
A
559 565Right-handed alpha
Helix 18
AB9
A
570 588Right-handed alpha
Helix 19
AC1
A
600 615Right-handed alpha
Helix 20
AC2
A
621 633Right-handed alpha
Helix 21
AC3
A
651 662Right-handed alpha
Helix 22
AC4
A
673 684Right-handed alpha
Helix 23
AC5
A
730 738Right-handed alpha
Helix 24
AC6
A
742 753Right-handed alpha
Helix 25
AC7
A
762 778Right-handed alpha
Helix 26
AC8
A
790 797Right-handed alpha
Helix 27
AC9
A
823 831Right-handed alpha
Helix 28
AD1
A
833 866Right-handed alpha
Helix 29
AD2
A
874 881Right-handed alpha
Helix 30
AD3
A
887 896Right-handed alpha
Helix 31
AD4
A
901 908Right-handed alpha
Helix 32
AD5
A
909 911Right-handed 310
Helix 33
AD6
A
912 917Right-handed alpha
Helix 34
AD7
A
922 948Right-handed alpha
Helix 35
AD8
A
961 985Right-handed alpha
Helix 36
AD9
A
989 1011Right-handed alpha
Helix 37
AE1
A
1020 1024Right-handed 310
Helix 38
AE2
A
1025 1033Right-handed alpha
Helix 39
AE3
A
1035 1062Right-handed alpha
Helix 40
AE4
C
51 74Right-handed alpha
Helix 41
AE5
C
131 136Right-handed alpha
Helix 42
AE6
C
139 145Right-handed alpha
Helix 43
AE7
C
146 152Right-handed alpha
Helix 44
AE8
C
172 177Right-handed alpha
Helix 45
AE9
C
206 212Right-handed alpha
Helix 46
AF1
C
222 227Right-handed alpha
Helix 47
AF2
C
239 243Right-handed 310
Helix 48
AF3
C
250 253Right-handed 310
Helix 49
AF4
C
254 262Right-handed alpha
Helix 50
AF5
C
323 350Right-handed alpha
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There are 10 sheets in PDB entry 6K7J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
219 221anti-parallel
Strand 3
A
233 235anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
156 159anti-parallel
Strand 3
A
263 269anti-parallel
Strand 4
A
168 174anti-parallel
Strand 5
A
250 251anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
194 197anti-parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
817 819anti-parallel
Strand 3
A
799 803parallel
Strand 4
A
780 785parallel
Strand 5
A
403 408parallel
Strand 6
A
665 669parallel
Strand 7
A
755 758parallel
Strand 8
A
726 729parallel
Strand 9
A
693 696parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 430first strand
Strand 2
A
420 426anti-parallel
Strand 3
A
641 645anti-parallel
Strand 4
A
590 598anti-parallel
Strand 5
A
553 558anti-parallel
Strand 6
A
540 545anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
506 508first strand
Strand 2
A
514 518anti-parallel
Strand 3
A
522 526anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
307 313anti-parallel
Strand 3
C
118 125anti-parallel
Strand 4
C
269 276anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
290 297anti-parallel
Strand 3
C
106 109anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 103first strand
Strand 2
C
290 297anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
194 196anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 163first strand
Strand 2
C
166 167anti-parallel
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