Analysis of interatomic Contacts of Structural Units in PDB entry:
6K7K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6K7K entry

There are 2 chains in PDB entry 6K7K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 35LYS 1063
C
 ARG 27ARG 351
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 51 helices in PDB entry 6K7K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 74Right-handed alpha
Helix 2
AA2
A
75 88Right-handed alpha
Helix 3
AA3
A
101 131Right-handed alpha
Helix 4
AA4
A
185 190Right-handed alpha
Helix 5
AA5
A
208 213Right-handed alpha
Helix 6
AA6
A
270 274Right-handed 310
Helix 7
AA7
A
288 324Right-handed alpha
Helix 8
AA8
A
341 352Right-handed alpha
Helix 9
AA9
A
353 355Right-handed 310
Helix 10
AB1
A
358 377Right-handed alpha
Helix 11
AB2
A
378 381Right-handed 310
Helix 12
AB3
A
393 397Right-handed 310
Helix 13
AB4
A
447 454Right-handed alpha
Helix 14
AB5
A
458 472Right-handed alpha
Helix 15
AB6
A
490 503Right-handed alpha
Helix 16
AB7
A
559 567Right-handed alpha
Helix 17
AB8
A
570 588Right-handed alpha
Helix 18
AB9
A
600 617Right-handed alpha
Helix 19
AC1
A
621 632Right-handed alpha
Helix 20
AC2
A
651 662Right-handed alpha
Helix 21
AC3
A
673 684Right-handed alpha
Helix 22
AC4
A
730 738Right-handed alpha
Helix 23
AC5
A
742 752Right-handed alpha
Helix 24
AC6
A
762 778Right-handed alpha
Helix 25
AC7
A
787 789Right-handed 310
Helix 26
AC8
A
790 797Right-handed alpha
Helix 27
AC9
A
809 815Right-handed alpha
Helix 28
AD1
A
823 831Right-handed alpha
Helix 29
AD2
A
833 866Right-handed alpha
Helix 30
AD3
A
874 880Right-handed alpha
Helix 31
AD4
A
888 896Right-handed alpha
Helix 32
AD5
A
901 908Right-handed alpha
Helix 33
AD6
A
910 919Right-handed alpha
Helix 34
AD7
A
922 948Right-handed alpha
Helix 35
AD8
A
961 985Right-handed alpha
Helix 36
AD9
A
989 1011Right-handed alpha
Helix 37
AE1
A
1025 1032Right-handed alpha
Helix 38
AE2
A
1033 1041Right-handed alpha
Helix 39
AE3
A
1042 1061Right-handed alpha
Helix 40
AE4
C
46 74Right-handed alpha
Helix 41
AE5
C
91 95Right-handed 310
Helix 42
AE6
C
131 136Right-handed alpha
Helix 43
AE7
C
139 145Right-handed alpha
Helix 44
AE8
C
146 151Right-handed alpha
Helix 45
AE9
C
172 177Right-handed alpha
Helix 46
AF1
C
206 212Right-handed alpha
Helix 47
AF2
C
222 227Right-handed alpha
Helix 48
AF3
C
239 243Right-handed 310
Helix 49
AF4
C
246 250Right-handed 310
Helix 50
AF5
C
254 262Right-handed alpha
Helix 51
AF6
C
323 350Right-handed alpha
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There are 9 sheets in PDB entry 6K7K. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 40first strand
Strand 2
A
218 221anti-parallel
Strand 3
A
233 235anti-parallel
Strand 4
A
244 245anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 138first strand
Strand 2
A
144 146anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 160first strand
Strand 2
A
262 269anti-parallel
Strand 3
A
168 174anti-parallel
Strand 4
A
250 251anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
194 198first strand
Strand 2
A
180 184anti-parallel
Strand 3
A
256 258anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
390 391first strand
Strand 2
A
817 819anti-parallel
Strand 3
A
799 803parallel
Strand 4
A
780 785parallel
Strand 5
A
403 408parallel
Strand 6
A
665 669parallel
Strand 7
A
755 758parallel
Strand 8
A
726 729parallel
Strand 9
A
693 695parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 430first strand
Strand 2
A
420 426anti-parallel
Strand 3
A
641 645anti-parallel
Strand 4
A
590 598anti-parallel
Strand 5
A
552 558anti-parallel
Strand 6
A
540 546anti-parallel
Strand 7
A
523 532anti-parallel
Strand 8
A
514 517anti-parallel
Strand 9
A
506 509anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 81first strand
Strand 2
C
307 314anti-parallel
Strand 3
C
118 125anti-parallel
Strand 4
C
269 276anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
102 110first strand
Strand 2
C
289 297anti-parallel
Strand 3
C
182 188anti-parallel
Strand 4
C
194 196anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
162 163first strand
Strand 2
C
166 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il