Analysis of interatomic Contacts of Structural Units in PDB entry:
6KRZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6KRZ entry

There are 7 chains in PDB entry 6KRZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 0ASP 371
B
SER 0CYS 369
C
SER 0CYS 369
D
GLU 1ALA 119
E
ASP 1ASN 107
F
GLU 1ALA 119
G
ASP 1ARG 61
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 6KRZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
101 105Right-handed 310
Helix 2
AA2
A
120 127Right-handed alpha
Helix 3
AA3
A
128 130Right-handed 310
Helix 4
AA4
A
134 157Right-handed alpha
Helix 5
AA5
A
159 163Right-handed 310
Helix 6
AA6
A
165 193Right-handed alpha
Helix 7
AA7
A
194 196Right-handed 310
Helix 8
AA8
A
197 228Right-handed alpha
Helix 9
AA9
A
231 254Right-handed alpha
Helix 10
AB1
A
255 262Right-handed 310
Helix 11
AB2
A
263 277Right-handed alpha
Helix 12
AB3
A
278 289Right-handed alpha
Helix 13
AB4
A
292 297Right-handed alpha
Helix 14
AB5
A
300 320Right-handed alpha
Helix 15
AB6
A
320 326Right-handed alpha
Helix 16
AB7
A
335 363Right-handed alpha
Helix 17
AB8
B
96 100Right-handed 310
Helix 18
AB9
B
101 105Right-handed 310
Helix 19
AC1
B
120 127Right-handed alpha
Helix 20
AC2
B
128 130Right-handed 310
Helix 21
AC3
B
134 157Right-handed alpha
Helix 22
AC4
B
159 163Right-handed 310
Helix 23
AC5
B
165 193Right-handed alpha
Helix 24
AC6
B
194 196Right-handed 310
Helix 25
AC7
B
197 228Right-handed alpha
Helix 26
AC8
B
231 253Right-handed alpha
Helix 27
AC9
B
254 255Right-handed 310
Helix 28
AD1
B
256 262Right-handed 310
Helix 29
AD2
B
263 276Right-handed alpha
Helix 30
AD3
B
278 289Right-handed alpha
Helix 31
AD4
B
290 296Right-handed alpha
Helix 32
AD5
B
299 320Right-handed alpha
Helix 33
AD6
B
320 326Right-handed alpha
Helix 34
AD7
B
335 364Right-handed alpha
Helix 35
AD8
C
101 105Right-handed 310
Helix 36
AD9
C
120 127Right-handed alpha
Helix 37
AE1
C
128 130Right-handed 310
Helix 38
AE2
C
134 157Right-handed alpha
Helix 39
AE3
C
165 193Right-handed alpha
Helix 40
AE4
C
194 196Right-handed 310
Helix 41
AE5
C
197 228Right-handed alpha
Helix 42
AE6
C
231 255Right-handed alpha
Helix 43
AE7
C
260 262Right-handed 310
Helix 44
AE8
C
263 276Right-handed alpha
Helix 45
AE9
C
278 290Right-handed alpha
Helix 46
AF1
C
290 297Right-handed alpha
Helix 47
AF2
C
299 320Right-handed alpha
Helix 48
AF3
C
320 325Right-handed alpha
Helix 49
AF4
C
335 363Right-handed alpha
Helix 50
AF5
D
28 32Right-handed 310
Helix 51
AF6
D
74 76Right-handed 310
Helix 52
AF7
D
87 91Right-handed 310
Helix 53
AF8
F
28 32Right-handed 310
Helix 54
AF9
F
87 91Right-handed 310
Helix 55
AG1
G
79 83Right-handed 310
Helix 56
AG2
H
87 91Right-handed 310
Helix 57
AG3
I
79 83Right-handed 310
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There are 19 sheets in PDB entry 6KRZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
95 96first strand
Strand 2
C
112 114anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
3 6first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
68 73anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 12first strand
Strand 2
D
112 116parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
45 51anti-parallel
Strand 6
D
58 60anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
10 12first strand
Strand 2
D
112 116parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
107 108anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
4 6first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
70 75anti-parallel
Strand 4
E
62 67anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
10 14first strand
Strand 2
E
102 107parallel
Strand 3
E
84 90anti-parallel
Strand 4
E
33 38anti-parallel
Strand 5
E
44 49anti-parallel
Strand 6
E
53 54anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
10 14first strand
Strand 2
E
102 107parallel
Strand 3
E
84 90anti-parallel
Strand 4
E
97 98anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 6first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 73anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
112 116parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
34 39anti-parallel
Strand 5
F
45 51anti-parallel
Strand 6
F
58 60anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
10 12first strand
Strand 2
F
112 116parallel
Strand 3
F
92 98anti-parallel
Strand 4
F
107 108anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
4 6first strand
Strand 2
G
19 25anti-parallel
Strand 3
G
70 75anti-parallel
Strand 4
G
62 67anti-parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
10 14first strand
Strand 2
G
102 107parallel
Strand 3
G
84 90anti-parallel
Strand 4
G
33 38anti-parallel
Strand 5
G
45 49anti-parallel
Strand 6
G
53 54anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
10 14first strand
Strand 2
G
102 107parallel
Strand 3
G
84 90anti-parallel
Strand 4
G
97 98anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
112 116parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
34 39anti-parallel
Strand 5
H
45 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 12first strand
Strand 2
H
112 116parallel
Strand 3
H
92 98anti-parallel
Strand 4
H
107 108anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
4 6first strand
Strand 2
I
19 25anti-parallel
Strand 3
I
70 75anti-parallel
Strand 4
I
62 67anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
10 14first strand
Strand 2
I
102 107parallel
Strand 3
I
84 90anti-parallel
Strand 4
I
33 38anti-parallel
Strand 5
I
45 49anti-parallel
Strand 6
I
53 54anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
10 14first strand
Strand 2
I
102 107parallel
Strand 3
I
84 90anti-parallel
Strand 4
I
97 98anti-parallel
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