Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6P

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6L6P entry

There are 3 chains in PDB entry 6L6P (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE 20	ILE 458
B	ILE 19	ILE 458
C	ILE 17	ILE 458

There are 47 helices in PDB entry 6L6P. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	25	Right-handed alpha
Helix 2	AA2	A	43	69	Right-handed alpha
Helix 3	AA3	A	103	111	Right-handed alpha
Helix 4	AA4	A	130	141	Right-handed alpha
Helix 5	AA5	A	152	161	Right-handed alpha
Helix 6	AA6	A	163	167	Right-handed alpha
Helix 7	AA7	A	179	181	Right-handed 310
Helix 8	AA8	A	199	203	Right-handed 310
Helix 9	AA9	A	212	215	Right-handed 310
Helix 10	AB1	A	256	261	Right-handed alpha
Helix 11	AB2	A	303	321	Right-handed alpha
Helix 12	AB3	A	335	342	Right-handed alpha
Helix 13	AB4	A	342	353	Right-handed alpha
Helix 14	AB5	A	380	392	Right-handed alpha
Helix 15	AB6	A	394	401	Right-handed alpha
Helix 16	AB7	A	424	440	Right-handed alpha
Helix 17	AB8	A	443	457	Right-handed alpha
Helix 18	AB9	B	43	69	Right-handed alpha
Helix 19	AC1	B	103	111	Right-handed alpha
Helix 20	AC2	B	130	141	Right-handed alpha
Helix 21	AC3	B	152	161	Right-handed alpha
Helix 22	AC4	B	163	167	Right-handed alpha
Helix 23	AC5	B	179	181	Right-handed 310
Helix 24	AC6	B	212	215	Right-handed 310
Helix 25	AC7	B	256	261	Right-handed alpha
Helix 26	AC8	B	303	321	Right-handed alpha
Helix 27	AC9	B	335	342	Right-handed alpha
Helix 28	AD1	B	342	351	Right-handed alpha
Helix 29	AD2	B	380	392	Right-handed alpha
Helix 30	AD3	B	394	401	Right-handed alpha
Helix 31	AD4	B	424	440	Right-handed alpha
Helix 32	AD5	B	443	457	Right-handed alpha
Helix 33	AD6	C	43	69	Right-handed alpha
Helix 34	AD7	C	103	111	Right-handed alpha
Helix 35	AD8	C	130	141	Right-handed alpha
Helix 36	AD9	C	152	161	Right-handed alpha
Helix 37	AE1	C	163	167	Right-handed alpha
Helix 38	AE2	C	179	181	Right-handed 310
Helix 39	AE3	C	212	215	Right-handed 310
Helix 40	AE4	C	256	261	Right-handed alpha
Helix 41	AE5	C	303	321	Right-handed alpha
Helix 42	AE6	C	335	342	Right-handed alpha
Helix 43	AE7	C	342	352	Right-handed alpha
Helix 44	AE8	C	380	392	Right-handed alpha
Helix 45	AE9	C	394	401	Right-handed alpha
Helix 46	AF1	C	424	440	Right-handed alpha
Helix 47	AF2	C	443	457	Right-handed alpha

There are 13 sheets in PDB entry 6L6P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	80	first strand
Strand 2	A	402	421	anti-parallel
Strand 3	A	217	222	anti-parallel
Strand 4	A	168	173	anti-parallel
Strand 5	A	176	177	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	80	first strand
Strand 2	A	402	421	anti-parallel
Strand 3	A	268	280	parallel
Strand 4	A	365	377	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	207	208	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	183	188	first strand
Strand 2	A	191	196	anti-parallel
Strand 3	A	88	93	anti-parallel
Strand 4	A	244	249	anti-parallel
Strand 5	A	262	264	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	80	first strand
Strand 2	B	402	421	anti-parallel
Strand 3	B	217	222	anti-parallel
Strand 4	B	168	173	anti-parallel
Strand 5	B	176	177	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	72	80	first strand
Strand 2	B	402	421	anti-parallel
Strand 3	B	268	280	parallel
Strand 4	B	365	377	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	207	208	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	183	188	first strand
Strand 2	B	191	196	anti-parallel
Strand 3	B	88	93	anti-parallel
Strand 4	B	244	249	anti-parallel
Strand 5	B	262	264	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	80	first strand
Strand 2	C	402	421	anti-parallel
Strand 3	C	217	222	anti-parallel
Strand 4	C	168	173	anti-parallel
Strand 5	C	176	177	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	72	80	first strand
Strand 2	C	402	421	anti-parallel
Strand 3	C	268	280	parallel
Strand 4	C	365	377	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	207	208	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	183	188	first strand
Strand 2	C	191	196	anti-parallel
Strand 3	C	88	93	anti-parallel
Strand 4	C	244	249	anti-parallel
Strand 5	C	262	264	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	289	290	first strand
Strand 2	C	362	363	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6L6P

Analysis of interatomic Contacts of Structural Units in PDB entry:
6L6P