Analysis of interatomic Contacts of Structural Units in PDB entry:
6M6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M6C entry

There are 8 chains in PDB entry 6M6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 4GLN 229
B
LYS 7PRO 228
C
MET 1LYS 1118
D
LYS 3ALA 1502
E
ALA 2VAL 95
R
C 11 A 20
N
G 1 C 29
T
G 1 C 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 6M6C. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
31 47Right-handed alpha
Helix 2
AA2
A
74 83Right-handed alpha
Helix 3
AA3
A
112 114Right-handed 310
Helix 4
AA4
A
152 157Right-handed alpha
Helix 5
AA5
A
206 224Right-handed alpha
Helix 6
AA6
B
31 48Right-handed alpha
Helix 7
AA7
B
74 84Right-handed alpha
Helix 8
AA8
B
112 114Right-handed 310
Helix 9
AA9
B
152 157Right-handed alpha
Helix 10
AB1
B
206 223Right-handed alpha
Helix 11
AB2
B
224 226Right-handed 310
Helix 12
AB3
C
19 31Right-handed alpha
Helix 13
AB4
C
35 39Right-handed 310
Helix 14
AB5
C
43 52Right-handed alpha
Helix 15
AB6
C
79 87Right-handed alpha
Helix 16
AB7
C
193 200Right-handed alpha
Helix 17
AB8
C
203 212Right-handed alpha
Helix 18
AB9
C
214 222Right-handed alpha
Helix 19
AC1
C
223 229Right-handed alpha
Helix 20
AC2
C
230 243Right-handed alpha
Helix 21
AC3
C
249 261Right-handed alpha
Helix 22
AC4
C
270 282Right-handed alpha
Helix 23
AC5
C
302 316Right-handed alpha
Helix 24
AC6
C
335 359Right-handed alpha
Helix 25
AC7
C
368 373Right-handed alpha
Helix 26
AC8
C
375 389Right-handed alpha
Helix 27
AC9
C
399 407Right-handed alpha
Helix 28
AD1
C
424 429Right-handed alpha
Helix 29
AD2
C
431 435Right-handed 310
Helix 30
AD3
C
487 492Right-handed alpha
Helix 31
AD4
C
525 529Right-handed 310
Helix 32
AD5
C
535 540Right-handed 310
Helix 33
AD6
C
543 547Right-handed 310
Helix 34
AD7
C
549 553Right-handed 310
Helix 35
AD8
C
554 565Right-handed alpha
Helix 36
AD9
C
566 568Right-handed 310
Helix 37
AE1
C
583 591Right-handed alpha
Helix 38
AE2
C
692 697Right-handed alpha
Helix 39
AE3
C
730 735Right-handed 310
Helix 40
AE4
C
768 779Right-handed alpha
Helix 41
AE5
C
854 858Right-handed 310
Helix 42
AE6
C
872 874Right-handed 310
Helix 43
AE7
C
875 880Right-handed alpha
Helix 44
AE8
C
882 898Right-handed alpha
Helix 45
AE9
C
910 932Right-handed alpha
Helix 46
AF1
C
937 949Right-handed alpha
Helix 47
AF2
C
958 968Right-handed alpha
Helix 48
AF3
C
1000 1004Right-handed 310
Helix 49
AF4
C
1033 1043Right-handed alpha
Helix 50
AF5
C
1045 1054Right-handed alpha
Helix 51
AF6
C
1059 1073Right-handed alpha
Helix 52
AF7
C
1082 1094Right-handed alpha
Helix 53
AF8
D
14 21Right-handed alpha
Helix 54
AF9
D
46 51Right-handed alpha
Helix 55
AG1
D
82 88Right-handed 310
Helix 56
AG2
D
102 107Right-handed alpha
Helix 57
AG3
D
110 117Right-handed alpha
Helix 58
AG4
D
119 128Right-handed alpha
Helix 59
AG5
D
154 163Right-handed alpha
Helix 60
AG6
D
423 426Right-handed 310
Helix 61
AG7
D
457 467Right-handed alpha
Helix 62
AG8
D
469 481Right-handed alpha
Helix 63
AG9
D
485 506Right-handed alpha
Helix 64
AH1
D
508 511Right-handed 310
Helix 65
AH2
D
521 525Right-handed 310
Helix 66
AH3
D
538 561Right-handed alpha
Helix 67
AH4
D
563 583Right-handed alpha
Helix 68
AH5
D
602 608Right-handed alpha
Helix 69
AH6
D
612 618Right-handed alpha
Helix 70
AH7
D
646 653Right-handed alpha
Helix 71
AH8
D
653 664Right-handed alpha
Helix 72
AH9
D
669 678Right-handed alpha
Helix 73
AI1
D
679 683Right-handed 310
Helix 74
AI2
D
685 695Right-handed alpha
Helix 75
AI3
D
709 711Right-handed 310
Helix 76
AI4
D
732 737Right-handed alpha
Helix 77
AI5
D
752 762Right-handed alpha
Helix 78
AI6
D
764 768Right-handed 310
Helix 79
AI7
D
782 793Right-handed alpha
Helix 80
AI8
D
808 819Right-handed alpha
Helix 81
AI9
D
836 841Right-handed alpha
Helix 82
AJ1
D
845 855Right-handed alpha
Helix 83
AJ2
D
876 891Right-handed alpha
Helix 84
AJ3
D
892 900Right-handed alpha
Helix 85
AJ4
D
907 923Right-handed alpha
Helix 86
AJ5
D
923 944Right-handed alpha
Helix 87
AJ6
D
950 954Right-handed 310
Helix 88
AJ7
D
958 980Right-handed alpha
Helix 89
AJ8
D
984 1015Right-handed alpha
Helix 90
AJ9
D
1018 1026Right-handed alpha
Helix 91
AK1
D
1031 1040Right-handed alpha
Helix 92
AK2
D
1066 1102Right-handed alpha
Helix 93
AK3
D
1136 1145Right-handed alpha
Helix 94
AK4
D
1167 1179Right-handed alpha
Helix 95
AK5
D
1202 1206Right-handed alpha
Helix 96
AK6
D
1220 1231Right-handed alpha
Helix 97
AK7
D
1232 1236Right-handed 310
Helix 98
AK8
D
1255 1264Right-handed alpha
Helix 99
AK9
D
1331 1340Right-handed alpha
Helix 100
AL1
D
1340 1359Right-handed alpha
Helix 101
AL2
D
1364 1376Right-handed alpha
Helix 102
AL3
D
1397 1408Right-handed alpha
Helix 103
AL4
D
1423 1430Right-handed alpha
Helix 104
AL5
D
1433 1441Right-handed alpha
Helix 105
AL6
D
1442 1454Right-handed alpha
Helix 106
AL7
D
1462 1468Right-handed alpha
Helix 107
AL8
D
1474 1478Right-handed 310
Helix 108
AL9
D
1489 1501Right-handed alpha
Helix 109
AM1
E
5 13Right-handed alpha
Helix 110
AM2
E
15 33Right-handed alpha
Helix 111
AM3
E
41 45Right-handed 310
Helix 112
AM4
E
59 71Right-handed alpha
Helix 113
AM5
E
81 93Right-handed alpha
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There are 48 sheets in PDB entry 6M6C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
10 16first strand
Strand 2
A
20 28anti-parallel
Strand 3
A
192 201anti-parallel
Strand 4
A
174 184anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
96 104first strand
Strand 2
A
137 147anti-parallel
Strand 3
A
50 58anti-parallel
Strand 4
A
165 166anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
87 89first strand
Strand 2
A
120 122anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
108 110first strand
Strand 2
A
128 131anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
150 151first strand
Strand 2
A
169 170anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 16first strand
Strand 2
B
20 28anti-parallel
Strand 3
B
189 201anti-parallel
Strand 4
B
174 186anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
96 104first strand
Strand 2
B
137 147anti-parallel
Strand 3
B
50 58anti-parallel
Strand 4
B
165 166anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
87 89first strand
Strand 2
B
120 122anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
107 110first strand
Strand 2
B
128 132anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
150 151first strand
Strand 2
B
169 170anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
2 5first strand
Strand 2
C
899 902parallel
Strand 3
C
579 580parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
65 73first strand
Strand 2
C
91 101anti-parallel
Strand 3
C
108 119anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
127 129first strand
Strand 2
C
132 136anti-parallel
Strand 3
C
392 394anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
331 334first strand
Strand 2
C
138 142anti-parallel
Strand 3
C
409 411parallel
Strand 4
C
452 454anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
145 150first strand
Strand 2
C
158 163anti-parallel
Strand 3
C
172 176anti-parallel
Strand 4
C
182 186anti-parallel
Strand 5
C
189 192anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
291 294first strand
Strand 2
C
297 300anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 461first strand
Strand 2
C
467 475anti-parallel
Strand 3
C
478 486anti-parallel
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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
460 461first strand
Strand 2
C
467 475anti-parallel
Strand 3
C
531 532anti-parallel
Strand 4
C
496 497parallel
Strand 5
C
513 517anti-parallel
Strand 6
C
520 524anti-parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
503 504first strand
Strand 2
C
507 508anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
595 596first strand
Strand 2
C
654 657anti-parallel
Strand 3
C
640 641anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
620 624first strand
Strand 2
C
610 615anti-parallel
Strand 3
C
601 606anti-parallel
Strand 4
C
648 649anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
629 630first strand
Strand 2
C
636 637anti-parallel
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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
661 662first strand
Strand 2
C
665 666anti-parallel
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There are 8 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
971 972first strand
Strand 2
C
987 996anti-parallel
Strand 3
C
838 841anti-parallel
Strand 4
C
846 853anti-parallel
Strand 5
C
688 691parallel
Strand 6
C
869 871anti-parallel
Strand 7
C
669 676parallel
Strand 8
C
987 996anti-parallel
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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
718 719first strand
Strand 2
C
702 715anti-parallel
Strand 3
C
819 831anti-parallel
Strand 4
C
798 806anti-parallel
Strand 5
C
748 749anti-parallel
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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
721 722first strand
Strand 2
C
758 761anti-parallel
Strand 3
C
785 787anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
754 756first strand
Strand 2
C
790 791anti-parallel
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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1006 1008first strand
Strand 2
D
626 633anti-parallel
Strand 3
D
744 748anti-parallel
Strand 4
D
700 703anti-parallel
Strand 5
D
713 721anti-parallel
Strand 6
D
641 645parallel
Strand 7
D
726 728anti-parallel
Strand 8
D
626 633parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1031 1032first strand
Strand 2
D
621 622anti-parallel
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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1097 1102first strand
Strand 2
D
7 12anti-parallel
Strand 3
D
1456 1457anti-parallel
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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
22 25first strand
Strand 2
D
90 100parallel
Strand 3
D
513 519anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
152 153first strand
Strand 2
D
132 136anti-parallel
Strand 3
D
453 455anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
141 142first strand
Strand 2
D
145 146anti-parallel
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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
166 170first strand
Strand 2
D
392 396anti-parallel
Strand 3
D
201 205anti-parallel
Strand 4
D
184 185anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
190 192first strand
Strand 2
D
195 196anti-parallel
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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
398 402first strand
Strand 2
D
443 447anti-parallel
Strand 3
D
433 438anti-parallel
Strand 4
D
414 415anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
420 422first strand
Strand 2
D
427 428anti-parallel
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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
527 529first strand
Strand 2
D
535 537anti-parallel
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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
805 806first strand
Strand 2
D
827 829parallel
Strand 3
D
833 834anti-parallel
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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
842 843first strand
Strand 2
D
864 868parallel
Strand 3
D
871 875anti-parallel
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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1106 1109first strand
Strand 2
D
1199 1201parallel
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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1118 1121first strand
Strand 2
D
1185 1188anti-parallel
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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1123 1126first strand
Strand 2
D
1131 1134anti-parallel
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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1153 1155first strand
Strand 2
D
1158 1160anti-parallel
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There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1300 1305first strand
Strand 2
D
1290 1295anti-parallel
Strand 3
D
1279 1285anti-parallel
Strand 4
D
1318 1319anti-parallel
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There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1394 1396first strand
Strand 2
D
1378 1383anti-parallel
Strand 3
D
1416 1419anti-parallel
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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1485 1488first strand
Strand 2
E
73 76anti-parallel
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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
47 49first strand
Strand 2
E
54 56anti-parallel
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