Analysis of interatomic Contacts of Structural Units in PDB entry:
6MJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MJL entry

There are 2 chains in PDB entry 6MJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 72SER 497
A
 ASN 168VAL 176
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 6MJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
77 87Right-handed alpha
Helix 2
AA2
B
89 105Right-handed alpha
Helix 3
AA3
B
111 118Right-handed alpha
Helix 4
AA4
B
120 129Right-handed alpha
Helix 5
AA5
B
133 149Right-handed alpha
Helix 6
AA6
B
151 161Right-handed alpha
Helix 7
AA7
B
162 171Right-handed alpha
Helix 8
AA8
B
175 191Right-handed alpha
Helix 9
AA9
B
193 203Right-handed alpha
Helix 10
AB1
B
205 212Right-handed alpha
Helix 11
AB2
B
217 221Right-handed 310
Helix 12
AB3
B
222 238Right-handed alpha
Helix 13
AB4
B
245 260Right-handed alpha
Helix 14
AB5
B
264 279Right-handed alpha
Helix 15
AB6
B
282 292Right-handed alpha
Helix 16
AB7
B
294 302Right-handed alpha
Helix 17
AB8
B
306 321Right-handed alpha
Helix 18
AB9
B
324 334Right-handed alpha
Helix 19
AC1
B
335 338Right-handed 310
Helix 20
AC2
B
339 344Right-handed alpha
Helix 21
AC3
B
348 364Right-handed alpha
Helix 22
AC4
B
366 376Right-handed alpha
Helix 23
AC5
B
377 388Right-handed alpha
Helix 24
AC6
B
390 408Right-handed alpha
Helix 25
AC7
B
409 419Right-handed alpha
Helix 26
AC8
B
421 429Right-handed alpha
Helix 27
AC9
B
433 454Right-handed alpha
Helix 28
AD1
B
456 467Right-handed alpha
Helix 29
AD2
B
468 476Right-handed alpha
Helix 30
AD3
B
481 496Right-handed alpha
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There are no sheets in PDB entry 6MJL
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il