Analysis of interatomic Contacts of Structural Units in PDB entry:
6MSV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MSV entry

There are 12 chains in PDB entry 6MSV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1088PRO 1173
B
ILE 1091PRO 1173
C
SER 1089PRO 1173
D
GLY 1084PRO 1173
E
SER 1090PRO 1173
F
SER 1090PRO 1173
G
ILE 1091PRO 1173
H
LEU 1085PRO 1173
I
SER 1090PRO 1173
J
ILE 1091PRO 1173
K
SER 1090PRO 1173
L
ILE 1091PRO 1173
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 6MSV


There are 18 sheets in PDB entry 6MSV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1137 1140first strand
Strand 2
A
1103 1107anti-parallel
Strand 3
A
1094 1098anti-parallel
Strand 4
J
1095 1098anti-parallel
Strand 5
J
1103 1106anti-parallel
Strand 6
J
1137 1140anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1166 1171first strand
Strand 2
A
1148 1157anti-parallel
Strand 3
A
1113 1121anti-parallel
Strand 4
A
1129 1133anti-parallel
Strand 5
E
1129 1133parallel
Strand 6
E
1113 1121anti-parallel
Strand 7
E
1148 1157anti-parallel
Strand 8
E
1166 1171anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1137 1140first strand
Strand 2
B
1103 1107anti-parallel
Strand 3
B
1094 1098anti-parallel
Strand 4
L
1095 1098anti-parallel
Strand 5
L
1103 1106anti-parallel
Strand 6
L
1137 1140anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1166 1171first strand
Strand 2
B
1148 1157anti-parallel
Strand 3
B
1113 1121anti-parallel
Strand 4
B
1129 1133anti-parallel
Strand 5
C
1129 1133parallel
Strand 6
C
1114 1121anti-parallel
Strand 7
C
1148 1156anti-parallel
Strand 8
C
1166 1171anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1137 1140first strand
Strand 2
C
1103 1107anti-parallel
Strand 3
C
1094 1098anti-parallel
Strand 4
I
1094 1098anti-parallel
Strand 5
I
1103 1107anti-parallel
Strand 6
I
1137 1140anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1137 1140first strand
Strand 2
D
1103 1106anti-parallel
Strand 3
D
1095 1098anti-parallel
Strand 4
F
1094 1098anti-parallel
Strand 5
F
1103 1107anti-parallel
Strand 6
F
1137 1140anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1129 1133first strand
Strand 2
D
1113 1121anti-parallel
Strand 3
D
1148 1157anti-parallel
Strand 4
D
1160 1161anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1129 1133first strand
Strand 2
D
1113 1121anti-parallel
Strand 3
D
1148 1157anti-parallel
Strand 4
D
1166 1171anti-parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
1137 1140first strand
Strand 2
E
1103 1107anti-parallel
Strand 3
E
1094 1098anti-parallel
Strand 4
K
1094 1098anti-parallel
Strand 5
K
1103 1107anti-parallel
Strand 6
K
1137 1140anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
1129 1133first strand
Strand 2
F
1113 1121anti-parallel
Strand 3
F
1148 1157anti-parallel
Strand 4
F
1166 1171anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
1137 1140first strand
Strand 2
G
1103 1107anti-parallel
Strand 3
G
1094 1098anti-parallel
Strand 4
H
1095 1098anti-parallel
Strand 5
H
1103 1106anti-parallel
Strand 6
H
1137 1140anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
1129 1133first strand
Strand 2
G
1113 1121anti-parallel
Strand 3
G
1148 1157anti-parallel
Strand 4
G
1160 1161anti-parallel
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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
1129 1133first strand
Strand 2
G
1113 1121anti-parallel
Strand 3
G
1148 1157anti-parallel
Strand 4
G
1166 1171anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
1129 1133first strand
Strand 2
H
1113 1121anti-parallel
Strand 3
H
1148 1157anti-parallel
Strand 4
H
1166 1171anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
1129 1133first strand
Strand 2
I
1113 1121anti-parallel
Strand 3
I
1148 1157anti-parallel
Strand 4
I
1166 1171anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
1129 1133first strand
Strand 2
J
1115 1121anti-parallel
Strand 3
J
1148 1155anti-parallel
Strand 4
J
1166 1171anti-parallel
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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
1129 1133first strand
Strand 2
K
1113 1121anti-parallel
Strand 3
K
1148 1157anti-parallel
Strand 4
K
1166 1171anti-parallel
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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
1129 1133first strand
Strand 2
L
1113 1121anti-parallel
Strand 3
L
1148 1157anti-parallel
Strand 4
L
1166 1171anti-parallel
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