Analysis of interatomic Contacts of Structural Units in PDB entry:
6N60

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6N60 entry

There are 9 chains in PDB entry 6N60 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 5	GLU 235
B	THR 6	LEU 237
C	TYR 3	GLU 1342
D	GLU 16	ARG 1372
E	ALA 2	LEU 80
F	THR 94	PHE 610
M	GLY 1	GLY 21
N	G 1	T 29
T	A 1	C 24

There are121 helices in PDB entry 6N60. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	50	Right-handed alpha
Helix 2	AA2	A	77	87	Right-handed alpha
Helix 3	AA3	A	111	115	Right-handed 310
Helix 4	AA4	A	212	228	Right-handed alpha
Helix 5	AA5	A	229	231	Right-handed 310
Helix 6	AA6	B	34	50	Right-handed alpha
Helix 7	AA7	B	77	87	Right-handed alpha
Helix 8	AA8	B	154	158	Right-handed 310
Helix 9	AA9	B	212	229	Right-handed alpha
Helix 10	AB1	C	28	39	Right-handed alpha
Helix 11	AB2	C	48	57	Right-handed alpha
Helix 12	AB3	C	81	89	Right-handed alpha
Helix 13	AB4	C	163	167	Right-handed 310
Helix 14	AB5	C	206	213	Right-handed alpha
Helix 15	AB6	C	216	225	Right-handed alpha
Helix 16	AB7	C	256	260	Right-handed 310
Helix 17	AB8	C	270	280	Right-handed alpha
Helix 18	AB9	C	291	295	Right-handed 310
Helix 19	AC1	C	318	328	Right-handed alpha
Helix 20	AC2	C	345	353	Right-handed alpha
Helix 21	AC3	C	358	371	Right-handed alpha
Helix 22	AC4	C	377	390	Right-handed alpha
Helix 23	AC5	C	398	409	Right-handed alpha
Helix 24	AC6	C	421	437	Right-handed alpha
Helix 25	AC7	C	447	449	Right-handed 310
Helix 26	AC8	C	455	482	Right-handed alpha
Helix 27	AC9	C	488	493	Right-handed alpha
Helix 28	AD1	C	494	508	Right-handed alpha
Helix 29	AD2	C	519	528	Right-handed alpha
Helix 30	AD3	C	551	555	Right-handed 310
Helix 31	AD4	C	608	614	Right-handed alpha
Helix 32	AD5	C	662	667	Right-handed alpha
Helix 33	AD6	C	670	674	Right-handed 310
Helix 34	AD7	C	675	686	Right-handed alpha
Helix 35	AD8	C	687	689	Right-handed 310
Helix 36	AD9	C	704	712	Right-handed alpha
Helix 37	AE1	C	820	826	Right-handed alpha
Helix 38	AE2	C	896	907	Right-handed alpha
Helix 39	AE3	C	942	981	Right-handed alpha
Helix 40	AE4	C	987	992	Right-handed alpha
Helix 41	AE5	C	993	998	Right-handed 310
Helix 42	AE6	C	1007	1038	Right-handed alpha
Helix 43	AE7	C	1081	1085	Right-handed 310
Helix 44	AE8	C	1101	1107	Right-handed alpha
Helix 45	AE9	C	1109	1134	Right-handed alpha
Helix 46	AF1	C	1137	1150	Right-handed alpha
Helix 47	AF2	C	1165	1177	Right-handed alpha
Helix 48	AF3	C	1191	1202	Right-handed alpha
Helix 49	AF4	C	1238	1243	Right-handed alpha
Helix 50	AF5	C	1271	1281	Right-handed alpha
Helix 51	AF6	C	1284	1292	Right-handed alpha
Helix 52	AF7	C	1297	1311	Right-handed alpha
Helix 53	AF8	C	1320	1333	Right-handed alpha
Helix 54	AF9	D	26	33	Right-handed alpha
Helix 55	AG1	D	94	100	Right-handed 310
Helix 56	AG2	D	113	119	Right-handed alpha
Helix 57	AG3	D	122	128	Right-handed alpha
Helix 58	AG4	D	131	140	Right-handed alpha
Helix 59	AG5	D	161	169	Right-handed alpha
Helix 60	AG6	D	181	192	Right-handed alpha
Helix 61	AG7	D	193	208	Right-handed alpha
Helix 62	AG8	D	210	231	Right-handed alpha
Helix 63	AG9	D	233	236	Right-handed 310
Helix 64	AH1	D	246	250	Right-handed 310
Helix 65	AH2	D	255	259	Right-handed 310
Helix 66	AH3	D	263	285	Right-handed alpha
Helix 67	AH4	D	288	308	Right-handed alpha
Helix 68	AH5	D	326	332	Right-handed alpha
Helix 69	AH6	D	370	377	Right-handed alpha
Helix 70	AH7	D	377	388	Right-handed alpha
Helix 71	AH8	D	393	404	Right-handed alpha
Helix 72	AH9	D	407	417	Right-handed alpha
Helix 73	AI1	D	430	432	Right-handed 310
Helix 74	AI2	D	450	458	Right-handed alpha
Helix 75	AI3	D	473	483	Right-handed alpha
Helix 76	AI4	D	504	514	Right-handed alpha
Helix 77	AI5	D	529	539	Right-handed alpha
Helix 78	AI6	D	574	581	Right-handed alpha
Helix 79	AI7	D	588	593	Right-handed 310
Helix 80	AI8	D	597	613	Right-handed alpha
Helix 81	AI9	D	613	636	Right-handed alpha
Helix 82	AJ1	D	648	670	Right-handed alpha
Helix 83	AJ2	D	674	703	Right-handed alpha
Helix 84	AJ3	D	720	728	Right-handed alpha
Helix 85	AJ4	D	733	742	Right-handed alpha
Helix 86	AJ5	D	768	804	Right-handed alpha
Helix 87	AJ6	D	834	840	Right-handed alpha
Helix 88	AJ7	D	865	876	Right-handed alpha
Helix 89	AJ8	D	896	900	Right-handed alpha
Helix 90	AJ9	D	914	929	Right-handed alpha
Helix 91	AK1	D	1138	1146	Right-handed alpha
Helix 92	AK2	D	1216	1224	Right-handed alpha
Helix 93	AK3	D	1225	1244	Right-handed alpha
Helix 94	AK4	D	1249	1261	Right-handed alpha
Helix 95	AK5	D	1282	1295	Right-handed alpha
Helix 96	AK6	D	1308	1313	Right-handed alpha
Helix 97	AK7	D	1318	1325	Right-handed alpha
Helix 98	AK8	D	1327	1338	Right-handed alpha
Helix 99	AK9	D	1347	1354	Right-handed alpha
Helix 100	AL1	D	1360	1371	Right-handed alpha
Helix 101	AL2	E	6	13	Right-handed alpha
Helix 102	AL3	E	17	32	Right-handed alpha
Helix 103	AL4	E	45	56	Right-handed alpha
Helix 104	AL5	E	60	78	Right-handed alpha
Helix 105	AL6	F	96	108	Right-handed alpha
Helix 106	AL7	F	113	133	Right-handed alpha
Helix 107	AL8	F	137	144	Right-handed alpha
Helix 108	AL9	F	264	272	Right-handed alpha
Helix 109	AM1	F	355	392	Right-handed alpha
Helix 110	AM2	F	400	419	Right-handed alpha
Helix 111	AM3	F	420	424	Right-handed 310
Helix 112	AM4	F	426	447	Right-handed alpha
Helix 113	AM5	F	453	470	Right-handed alpha
Helix 114	AM6	F	481	487	Right-handed alpha
Helix 115	AM7	F	492	500	Right-handed alpha
Helix 116	AM8	F	518	523	Right-handed 310
Helix 117	AM9	F	530	551	Right-handed alpha
Helix 118	AN1	F	552	563	Right-handed alpha
Helix 119	AN2	F	572	581	Right-handed alpha
Helix 120	AN3	F	584	600	Right-handed alpha
Helix 121	AN4	F	604	610	Right-handed alpha

There are 43 sheets in PDB entry 6N60. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	13	18	first strand
Strand 2	A	24	31	anti-parallel
Strand 3	A	199	204	anti-parallel
Strand 4	A	184	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	104	first strand
Strand 2	A	140	147	anti-parallel
Strand 3	A	56	60	anti-parallel
Strand 4	A	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	90	91	first strand
Strand 2	A	122	123	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	131	133	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	12	13	first strand
Strand 2	B	23	31	anti-parallel
Strand 3	B	198	207	anti-parallel
Strand 4	B	180	190	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	59	first strand
Strand 2	B	141	149	anti-parallel
Strand 3	B	98	103	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	90	92	first strand
Strand 2	B	121	123	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	110	111	first strand
Strand 2	B	129	131	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	13	14	first strand
Strand 2	C	1182	1183	parallel
Strand 3	C	700	701	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	60	first strand
Strand 2	C	67	75	anti-parallel
Strand 3	C	93	104	anti-parallel
Strand 4	C	116	128	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	136	137	first strand
Strand 2	C	142	145	anti-parallel
Strand 3	C	512	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	149	151	first strand
Strand 2	C	451	453	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	154	158	first strand
Strand 2	C	173	177	anti-parallel
Strand 3	C	184	187	anti-parallel
Strand 4	C	195	198	anti-parallel
Strand 5	C	204	205	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	238	239	anti-parallel
Strand 3	C	227	231	anti-parallel
Strand 4	C	332	336	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	309	311	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	599	607	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	580	581	first strand
Strand 2	C	587	594	anti-parallel
Strand 3	C	652	654	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	637	first strand
Strand 2	C	642	646	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	716	717	first strand
Strand 2	C	782	785	anti-parallel
Strand 3	C	768	769	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	749	752	first strand
Strand 2	C	731	736	anti-parallel
Strand 3	C	722	727	anti-parallel
Strand 4	C	776	777	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	757	758	first strand
Strand 2	C	764	765	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	789	790	first strand
Strand 2	C	793	794	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1066	1067	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	798	804	anti-parallel
Strand 4	C	1096	1098	parallel
Strand 5	C	816	819	anti-parallel
Strand 6	C	1076	1080	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1066	1067	first strand
Strand 2	C	1225	1234	anti-parallel
Strand 3	C	1209	1210	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	846	847	first strand
Strand 2	C	830	843	anti-parallel
Strand 3	C	1046	1058	anti-parallel
Strand 4	C	926	935	anti-parallel
Strand 5	C	876	877	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	882	884	first strand
Strand 2	C	918	919	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	889	first strand
Strand 2	C	913	915	anti-parallel

Back to list of sheets
Back to top of page

There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1244	1246	first strand
Strand 2	D	350	356	anti-parallel
Strand 3	D	465	469	anti-parallel
Strand 4	D	421	425	anti-parallel
Strand 5	D	434	442	anti-parallel
Strand 6	D	365	369	parallel
Strand 7	D	447	448	anti-parallel
Strand 8	D	350	356	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1335	1339	first strand
Strand 2	D	20	24	anti-parallel
Strand 3	D	1341	1342	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	34	37	first strand
Strand 2	D	102	112	parallel
Strand 3	D	238	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	159	160	first strand
Strand 2	D	144	147	anti-parallel
Strand 3	D	177	179	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	262	first strand
Strand 2	F	505	506	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	526	527	first strand
Strand 2	D	547	558	parallel
Strand 3	D	562	573	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	706	707	first strand
Strand 2	D	714	715	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	809	811	first strand
Strand 2	D	894	895	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	820	822	first strand
Strand 2	D	880	882	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	825	826	first strand
Strand 2	D	831	833	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	991	996	first strand
Strand 2	D	981	985	anti-parallel
Strand 3	D	956	961	anti-parallel
Strand 4	D	1010	1011	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	965	967	first strand
Strand 2	D	973	975	anti-parallel
Strand 3	D	1002	1003	anti-parallel
Strand 4	D	1018	1019	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1161	1162	first strand
Strand 2	D	1203	1204	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1164	1165	first strand
Strand 2	D	1173	1176	anti-parallel
Strand 3	D	1187	1190	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1279	1281	first strand
Strand 2	D	1263	1268	anti-parallel
Strand 3	D	1301	1304	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	6	7	first strand
Strand 2	M	19	20	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6N60

Analysis of interatomic Contacts of Structural Units in PDB entry:
6N60