Analysis of interatomic Contacts of Structural Units in PDB entry:
6OON


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6OON entry

There are 2 chains in PDB entry 6OON (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 12ALA 861
B
 A 1 U 21
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 6OON. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 72Right-handed alpha
Helix 2
AA2
A
130 138Right-handed alpha
Helix 3
AA3
A
145 164Right-handed alpha
Helix 4
AA4
A
219 228Right-handed alpha
Helix 5
AA5
A
241 253Right-handed alpha
Helix 6
AA6
A
298 305Right-handed alpha
Helix 7
AA7
A
332 334Right-handed 310
Helix 8
AA8
A
347 359Right-handed alpha
Helix 9
AA9
A
361 375Right-handed alpha
Helix 10
AB1
A
383 389Right-handed alpha
Helix 11
AB2
A
455 473Right-handed alpha
Helix 12
AB3
A
489 491Right-handed 310
Helix 13
AB4
A
492 504Right-handed alpha
Helix 14
AB5
A
519 530Right-handed alpha
Helix 15
AB6
A
541 546Right-handed alpha
Helix 16
AB7
A
548 563Right-handed alpha
Helix 17
AB8
A
572 575Right-handed 310
Helix 18
AB9
A
576 581Right-handed 310
Helix 19
AC1
A
643 660Right-handed alpha
Helix 20
AC2
A
674 697Right-handed alpha
Helix 21
AC3
A
721 725Right-handed 310
Helix 22
AC4
A
777 789Right-handed alpha
Helix 23
AC5
A
802 819Right-handed alpha
Helix 24
AC6
A
840 848Right-handed alpha
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There are 9 sheets in PDB entry 6OON. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
617 624first strand
Strand 2
A
602 609anti-parallel
Strand 3
A
583 591anti-parallel
Strand 4
A
665 670parallel
Strand 5
A
703 710parallel
Strand 6
A
765 772anti-parallel
Strand 7
A
749 753anti-parallel
Strand 8
A
736 738anti-parallel
Strand 9
A
398 404anti-parallel
Strand 10
A
26 32anti-parallel
Strand 11
A
717 719anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
170 173anti-parallel
Strand 3
A
186 198anti-parallel
Strand 4
A
181 183anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
165 167first strand
Strand 2
A
170 173anti-parallel
Strand 3
A
186 198anti-parallel
Strand 4
A
203 215anti-parallel
Strand 5
A
34 38anti-parallel
Strand 6
A
392 393anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
A
89 92anti-parallel
Strand 3
A
43 52anti-parallel
Strand 4
A
118 129anti-parallel
Strand 5
A
103 107anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
256 258anti-parallel
Strand 3
A
335 336anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
317 319anti-parallel
Strand 3
A
329 330anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 284first strand
Strand 2
A
296 297anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
410 411anti-parallel
Strand 3
A
569 570anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
483 486first strand
Strand 2
A
443 447parallel
Strand 3
A
509 514parallel
Strand 4
A
536 540parallel
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