Analysis of interatomic Contacts of Structural Units in PDB entry:
6P59


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6P59 entry

There are 8 chains in PDB entry 6P59 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
PRO 6HIS 160
W
MET 1GLU 98
Z
MET 17CYS 112
F
GLU 3ALA 220
A
VAL 5ARG 161
D
MET 1GLU 98
E
MET 17CYS 112
B
GLU 3ALA 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 6P59. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
C
7 14Right-handed alpha
Helix 2
AA2
C
36 50Right-handed alpha
Helix 3
AA3
C
72 74Right-handed 310
Helix 4
AA4
C
128 135Right-handed alpha
Helix 5
AA5
C
136 138Right-handed 310
Helix 6
AA6
C
139 149Right-handed alpha
Helix 7
AA7
W
23 36Right-handed alpha
Helix 8
AA8
W
38 42Right-handed 310
Helix 9
AA9
W
56 61Right-handed alpha
Helix 10
AB1
Z
33 37Right-handed alpha
Helix 11
AB2
Z
39 47Right-handed alpha
Helix 12
AB3
Z
66 83Right-handed alpha
Helix 13
AB4
Z
96 111Right-handed alpha
Helix 14
AB5
F
15 32Right-handed alpha
Helix 15
AB6
F
106 116Right-handed alpha
Helix 16
AB7
F
125 133Right-handed alpha
Helix 17
AB8
F
141 145Right-handed 310
Helix 18
AB9
F
151 167Right-handed alpha
Helix 19
AC1
F
211 217Right-handed alpha
Helix 20
AC2
A
6 14Right-handed alpha
Helix 21
AC3
A
36 50Right-handed alpha
Helix 22
AC4
A
72 74Right-handed 310
Helix 23
AC5
A
128 134Right-handed alpha
Helix 24
AC6
A
138 149Right-handed alpha
Helix 25
AC7
D
23 36Right-handed alpha
Helix 26
AC8
D
38 42Right-handed 310
Helix 27
AC9
D
56 61Right-handed alpha
Helix 28
AD1
E
33 37Right-handed alpha
Helix 29
AD2
E
39 47Right-handed alpha
Helix 30
AD3
E
53 57Right-handed 310
Helix 31
AD4
E
66 83Right-handed alpha
Helix 32
AD5
E
96 110Right-handed alpha
Helix 33
AD6
B
15 32Right-handed alpha
Helix 34
AD7
B
44 48Right-handed 310
Helix 35
AD8
B
106 115Right-handed alpha
Helix 36
AD9
B
125 133Right-handed alpha
Helix 37
AE1
B
141 145Right-handed 310
Helix 38
AE2
B
151 165Right-handed alpha
Helix 39
AE3
B
211 217Right-handed alpha
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There are 7 sheets in PDB entry 6P59. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 12 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
86 87first strand
Strand 2
C
94 103anti-parallel
Strand 3
C
106 115anti-parallel
Strand 4
C
120 127anti-parallel
Strand 5
C
24 28anti-parallel
Strand 6
C
55 59anti-parallel
Strand 7
C
64 70anti-parallel
Strand 8
F
6 14anti-parallel
Strand 9
F
85 94anti-parallel
Strand 10
F
66 76anti-parallel
Strand 11
F
54 62anti-parallel
Strand 12
F
41 43anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
86 87first strand
Strand 2
C
94 103anti-parallel
Strand 3
F
101 104parallel
Strand 4
F
85 94anti-parallel
Strand 5
F
66 76anti-parallel
Strand 6
F
54 62anti-parallel
Strand 7
F
41 43anti-parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
W
49 50first strand
Strand 2
W
44 46anti-parallel
Strand 3
W
73 77anti-parallel
Strand 4
W
2 9parallel
Strand 5
W
12 19anti-parallel
Strand 6
Z
28 32parallel
Strand 7
Z
18 22anti-parallel
Strand 8
Z
59 61parallel
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There are 12 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
86 87first strand
Strand 2
A
94 103anti-parallel
Strand 3
A
106 115anti-parallel
Strand 4
A
120 127anti-parallel
Strand 5
A
25 28anti-parallel
Strand 6
A
55 59anti-parallel
Strand 7
A
64 70anti-parallel
Strand 8
B
6 14anti-parallel
Strand 9
B
85 94anti-parallel
Strand 10
B
66 76anti-parallel
Strand 11
B
54 61anti-parallel
Strand 12
B
41 43anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
86 87first strand
Strand 2
A
94 103anti-parallel
Strand 3
B
101 104parallel
Strand 4
B
85 94anti-parallel
Strand 5
B
66 76anti-parallel
Strand 6
B
54 61anti-parallel
Strand 7
B
41 43anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
49 50first strand
Strand 2
D
43 46anti-parallel
Strand 3
D
73 78anti-parallel
Strand 4
D
2 9parallel
Strand 5
D
12 19anti-parallel
Strand 6
E
28 32parallel
Strand 7
E
18 22anti-parallel
Strand 8
E
59 61parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
80 81first strand
Strand 2
D
84 85anti-parallel
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