Analysis of interatomic Contacts of Structural Units in PDB entry:
6PUO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PUO entry

There are 4 chains in PDB entry 6PUO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 56TYR 1503
B
GLN 56TYR 1503
C
GLN 56TYR 1503
D
GLN 56TYR 1503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are220 helices in PDB entry 6PUO. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
56 67Right-handed alpha
Helix 2
AA2
A
114 119Right-handed alpha
Helix 3
AA3
A
150 161Right-handed alpha
Helix 4
AA4
A
183 202Right-handed alpha
Helix 5
AA5
A
213 229Right-handed alpha
Helix 6
AA6
A
232 236Right-handed 310
Helix 7
AA7
A
249 253Right-handed 310
Helix 8
AA8
A
298 310Right-handed alpha
Helix 9
AA9
A
333 346Right-handed alpha
Helix 10
AB1
A
359 367Right-handed alpha
Helix 11
AB2
A
375 387Right-handed alpha
Helix 12
AB3
A
398 412Right-handed alpha
Helix 13
AB4
A
429 443Right-handed alpha
Helix 14
AB5
A
449 462Right-handed alpha
Helix 15
AB6
A
465 471Right-handed alpha
Helix 16
AB7
A
480 483Right-handed 310
Helix 17
AB8
A
484 494Right-handed alpha
Helix 18
AB9
A
496 506Right-handed alpha
Helix 19
AC1
A
509 514Right-handed alpha
Helix 20
AC2
A
515 523Right-handed alpha
Helix 21
AC3
A
530 542Right-handed alpha
Helix 22
AC4
A
544 550Right-handed alpha
Helix 23
AC5
A
557 570Right-handed alpha
Helix 24
AC6
A
620 631Right-handed alpha
Helix 25
AC7
A
634 642Right-handed alpha
Helix 26
AC8
A
643 645Right-handed 310
Helix 27
AC9
A
647 663Right-handed alpha
Helix 28
AD1
A
668 697Right-handed alpha
Helix 29
AD2
A
702 706Right-handed 310
Helix 30
AD3
A
717 724Right-handed alpha
Helix 31
AD4
A
726 731Right-handed alpha
Helix 32
AD5
A
733 745Right-handed alpha
Helix 33
AD6
A
752 762Right-handed alpha
Helix 34
AD7
A
776 781Right-handed alpha
Helix 35
AD8
A
783 794Right-handed alpha
Helix 36
AD9
A
794 819Right-handed alpha
Helix 37
AE1
A
826 848Right-handed alpha
Helix 38
AE2
A
855 865Right-handed alpha
Helix 39
AE3
A
866 888Right-handed alpha
Helix 40
AE4
A
891 908Right-handed alpha
Helix 41
AE5
A
909 916Right-handed 310
Helix 42
AE6
A
920 956Right-handed alpha
Helix 43
AE7
A
965 980Right-handed alpha
Helix 44
AE8
A
1021 1036Right-handed alpha
Helix 45
AE9
A
1038 1056Right-handed alpha
Helix 46
AF1
A
1058 1077Right-handed alpha
Helix 47
AF2
A
1085 1098Right-handed alpha
Helix 48
AF3
A
1114 1142Right-handed alpha
Helix 49
AF4
A
1143 1165Right-handed alpha
Helix 50
AF5
A
1279 1282Right-handed 310
Helix 51
AF6
A
1288 1292Right-handed 310
Helix 52
AF7
A
1397 1404Right-handed alpha
Helix 53
AF8
A
1409 1419Right-handed alpha
Helix 54
AF9
A
1455 1463Right-handed alpha
Helix 55
AG1
A
1487 1496Right-handed alpha
Helix 56
AG2
B
57 67Right-handed alpha
Helix 57
AG3
B
114 119Right-handed alpha
Helix 58
AG4
B
150 161Right-handed alpha
Helix 59
AG5
B
183 202Right-handed alpha
Helix 60
AG6
B
213 229Right-handed alpha
Helix 61
AG7
B
232 236Right-handed 310
Helix 62
AG8
B
249 253Right-handed 310
Helix 63
AG9
B
298 310Right-handed alpha
Helix 64
AH1
B
333 346Right-handed alpha
Helix 65
AH2
B
359 367Right-handed alpha
Helix 66
AH3
B
375 387Right-handed alpha
Helix 67
AH4
B
398 412Right-handed alpha
Helix 68
AH5
B
429 443Right-handed alpha
Helix 69
AH6
B
449 462Right-handed alpha
Helix 70
AH7
B
465 471Right-handed alpha
Helix 71
AH8
B
480 483Right-handed 310
Helix 72
AH9
B
484 494Right-handed alpha
Helix 73
AI1
B
496 506Right-handed alpha
Helix 74
AI2
B
509 514Right-handed alpha
Helix 75
AI3
B
515 523Right-handed alpha
Helix 76
AI4
B
530 542Right-handed alpha
Helix 77
AI5
B
544 550Right-handed alpha
Helix 78
AI6
B
557 570Right-handed alpha
Helix 79
AI7
B
620 631Right-handed alpha
Helix 80
AI8
B
634 642Right-handed alpha
Helix 81
AI9
B
643 645Right-handed 310
Helix 82
AJ1
B
647 663Right-handed alpha
Helix 83
AJ2
B
668 697Right-handed alpha
Helix 84
AJ3
B
702 706Right-handed 310
Helix 85
AJ4
B
717 724Right-handed alpha
Helix 86
AJ5
B
726 731Right-handed alpha
Helix 87
AJ6
B
733 745Right-handed alpha
Helix 88
AJ7
B
752 762Right-handed alpha
Helix 89
AJ8
B
776 781Right-handed alpha
Helix 90
AJ9
B
783 794Right-handed alpha
Helix 91
AK1
B
794 819Right-handed alpha
Helix 92
AK2
B
826 848Right-handed alpha
Helix 93
AK3
B
855 865Right-handed alpha
Helix 94
AK4
B
866 888Right-handed alpha
Helix 95
AK5
B
891 908Right-handed alpha
Helix 96
AK6
B
909 916Right-handed 310
Helix 97
AK7
B
920 956Right-handed alpha
Helix 98
AK8
B
965 980Right-handed alpha
Helix 99
AK9
B
1021 1036Right-handed alpha
Helix 100
AL1
B
1038 1056Right-handed alpha
Helix 101
AL2
B
1058 1077Right-handed alpha
Helix 102
AL3
B
1085 1098Right-handed alpha
Helix 103
AL4
B
1114 1142Right-handed alpha
Helix 104
AL5
B
1143 1165Right-handed alpha
Helix 105
AL6
B
1279 1282Right-handed 310
Helix 106
AL7
B
1288 1292Right-handed 310
Helix 107
AL8
B
1397 1404Right-handed alpha
Helix 108
AL9
B
1409 1419Right-handed alpha
Helix 109
AM1
B
1455 1463Right-handed alpha
Helix 110
AM2
B
1487 1496Right-handed alpha
Helix 111
AM3
C
57 67Right-handed alpha
Helix 112
AM4
C
114 119Right-handed alpha
Helix 113
AM5
C
150 161Right-handed alpha
Helix 114
AM6
C
183 202Right-handed alpha
Helix 115
AM7
C
213 229Right-handed alpha
Helix 116
AM8
C
232 236Right-handed 310
Helix 117
AM9
C
249 253Right-handed 310
Helix 118
AN1
C
298 310Right-handed alpha
Helix 119
AN2
C
333 346Right-handed alpha
Helix 120
AN3
C
359 367Right-handed alpha
Helix 121
AN4
C
375 387Right-handed alpha
Helix 122
AN5
C
398 412Right-handed alpha
Helix 123
AN6
C
429 443Right-handed alpha
Helix 124
AN7
C
449 462Right-handed alpha
Helix 125
AN8
C
465 471Right-handed alpha
Helix 126
AN9
C
480 483Right-handed 310
Helix 127
AO1
C
484 494Right-handed alpha
Helix 128
AO2
C
496 506Right-handed alpha
Helix 129
AO3
C
509 514Right-handed alpha
Helix 130
AO4
C
515 523Right-handed alpha
Helix 131
AO5
C
530 542Right-handed alpha
Helix 132
AO6
C
544 550Right-handed alpha
Helix 133
AO7
C
557 570Right-handed alpha
Helix 134
AO8
C
620 631Right-handed alpha
Helix 135
AO9
C
634 642Right-handed alpha
Helix 136
AP1
C
643 645Right-handed 310
Helix 137
AP2
C
647 663Right-handed alpha
Helix 138
AP3
C
668 697Right-handed alpha
Helix 139
AP4
C
702 706Right-handed 310
Helix 140
AP5
C
717 724Right-handed alpha
Helix 141
AP6
C
726 731Right-handed alpha
Helix 142
AP7
C
733 745Right-handed alpha
Helix 143
AP8
C
752 762Right-handed alpha
Helix 144
AP9
C
776 781Right-handed alpha
Helix 145
AQ1
C
783 794Right-handed alpha
Helix 146
AQ2
C
794 819Right-handed alpha
Helix 147
AQ3
C
826 848Right-handed alpha
Helix 148
AQ4
C
855 865Right-handed alpha
Helix 149
AQ5
C
866 888Right-handed alpha
Helix 150
AQ6
C
891 908Right-handed alpha
Helix 151
AQ7
C
909 916Right-handed 310
Helix 152
AQ8
C
920 956Right-handed alpha
Helix 153
AQ9
C
965 980Right-handed alpha
Helix 154
AR1
C
1021 1036Right-handed alpha
Helix 155
AR2
C
1038 1056Right-handed alpha
Helix 156
AR3
C
1058 1077Right-handed alpha
Helix 157
AR4
C
1085 1098Right-handed alpha
Helix 158
AR5
C
1114 1142Right-handed alpha
Helix 159
AR6
C
1143 1165Right-handed alpha
Helix 160
AR7
C
1279 1282Right-handed 310
Helix 161
AR8
C
1288 1292Right-handed 310
Helix 162
AR9
C
1397 1404Right-handed alpha
Helix 163
AS1
C
1409 1419Right-handed alpha
Helix 164
AS2
C
1455 1463Right-handed alpha
Helix 165
AS3
C
1487 1496Right-handed alpha
Helix 166
AS4
D
57 67Right-handed alpha
Helix 167
AS5
D
114 119Right-handed alpha
Helix 168
AS6
D
150 161Right-handed alpha
Helix 169
AS7
D
183 202Right-handed alpha
Helix 170
AS8
D
213 229Right-handed alpha
Helix 171
AS9
D
232 236Right-handed 310
Helix 172
AT1
D
249 253Right-handed 310
Helix 173
AT2
D
298 310Right-handed alpha
Helix 174
AT3
D
333 346Right-handed alpha
Helix 175
AT4
D
359 367Right-handed alpha
Helix 176
AT5
D
375 387Right-handed alpha
Helix 177
AT6
D
398 412Right-handed alpha
Helix 178
AT7
D
429 443Right-handed alpha
Helix 179
AT8
D
449 462Right-handed alpha
Helix 180
AT9
D
465 471Right-handed alpha
Helix 181
AU1
D
480 483Right-handed 310
Helix 182
AU2
D
484 494Right-handed alpha
Helix 183
AU3
D
496 506Right-handed alpha
Helix 184
AU4
D
509 514Right-handed alpha
Helix 185
AU5
D
515 523Right-handed alpha
Helix 186
AU6
D
530 542Right-handed alpha
Helix 187
AU7
D
544 550Right-handed alpha
Helix 188
AU8
D
557 570Right-handed alpha
Helix 189
AU9
D
620 631Right-handed alpha
Helix 190
AV1
D
634 642Right-handed alpha
Helix 191
AV2
D
643 645Right-handed 310
Helix 192
AV3
D
647 663Right-handed alpha
Helix 193
AV4
D
668 697Right-handed alpha
Helix 194
AV5
D
702 706Right-handed 310
Helix 195
AV6
D
717 724Right-handed alpha
Helix 196
AV7
D
726 731Right-handed alpha
Helix 197
AV8
D
733 745Right-handed alpha
Helix 198
AV9
D
752 762Right-handed alpha
Helix 199
AW1
D
776 781Right-handed alpha
Helix 200
AW2
D
783 794Right-handed alpha
Helix 201
AW3
D
794 819Right-handed alpha
Helix 202
AW4
D
826 848Right-handed alpha
Helix 203
AW5
D
855 865Right-handed alpha
Helix 204
AW6
D
866 888Right-handed alpha
Helix 205
AW7
D
891 908Right-handed alpha
Helix 206
AW8
D
909 916Right-handed 310
Helix 207
AW9
D
920 956Right-handed alpha
Helix 208
AX1
D
965 980Right-handed alpha
Helix 209
AX2
D
1021 1036Right-handed alpha
Helix 210
AX3
D
1038 1056Right-handed alpha
Helix 211
AX4
D
1058 1077Right-handed alpha
Helix 212
AX5
D
1085 1098Right-handed alpha
Helix 213
AX6
D
1114 1142Right-handed alpha
Helix 214
AX7
D
1143 1165Right-handed alpha
Helix 215
AX8
D
1279 1282Right-handed 310
Helix 216
AX9
D
1288 1292Right-handed 310
Helix 217
AY1
D
1397 1404Right-handed alpha
Helix 218
AY2
D
1409 1419Right-handed alpha
Helix 219
AY3
D
1455 1463Right-handed alpha
Helix 220
AY4
D
1487 1496Right-handed alpha
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There are 32 sheets in PDB entry 6PUO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 71first strand
Strand 2
A
120 123anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
263 264first strand
Strand 2
A
128 132parallel
Strand 3
A
140 145anti-parallel
Strand 4
A
283 287parallel
Strand 5
A
237 243parallel
Strand 6
A
203 208parallel
Strand 7
A
169 174parallel
Strand 8
A
325 329parallel
Strand 9
A
350 351parallel
Strand 10
A
416 417parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
313 316first strand
Strand 2
A
319 322anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
708 709first strand
Strand 2
A
715 716anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1275 1277first strand
Strand 2
A
1334 1337parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1319 1320first strand
Strand 2
A
1323 1324anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1385 1386first strand
Strand 2
A
1372 1378anti-parallel
Strand 3
A
1346 1355anti-parallel
Strand 4
A
1440 1449parallel
Strand 5
A
1422 1429anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1385 1386first strand
Strand 2
A
1372 1378anti-parallel
Strand 3
A
1472 1477anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
68 71first strand
Strand 2
B
120 123anti-parallel
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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
263 264first strand
Strand 2
B
128 132parallel
Strand 3
B
140 145anti-parallel
Strand 4
B
283 287parallel
Strand 5
B
237 243parallel
Strand 6
B
203 208parallel
Strand 7
B
169 174parallel
Strand 8
B
325 329parallel
Strand 9
B
350 351parallel
Strand 10
B
416 417parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
313 316first strand
Strand 2
B
319 322anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
708 709first strand
Strand 2
B
715 716anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1275 1277first strand
Strand 2
B
1334 1337parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1319 1320first strand
Strand 2
B
1323 1324anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1385 1386first strand
Strand 2
B
1372 1378anti-parallel
Strand 3
B
1346 1355anti-parallel
Strand 4
B
1440 1449parallel
Strand 5
B
1422 1429anti-parallel
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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1385 1386first strand
Strand 2
B
1372 1378anti-parallel
Strand 3
B
1472 1477anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
68 71first strand
Strand 2
C
120 123anti-parallel
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There are 10 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
263 264first strand
Strand 2
C
128 132parallel
Strand 3
C
140 145anti-parallel
Strand 4
C
283 287parallel
Strand 5
C
237 243parallel
Strand 6
C
203 208parallel
Strand 7
C
169 174parallel
Strand 8
C
325 329parallel
Strand 9
C
350 351parallel
Strand 10
C
416 417parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
313 316first strand
Strand 2
C
319 322anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
708 709first strand
Strand 2
C
715 716anti-parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1275 1277first strand
Strand 2
C
1334 1337parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1319 1320first strand
Strand 2
C
1323 1324anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1385 1386first strand
Strand 2
C
1372 1378anti-parallel
Strand 3
C
1346 1355anti-parallel
Strand 4
C
1440 1449parallel
Strand 5
C
1422 1429anti-parallel
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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1385 1386first strand
Strand 2
C
1372 1378anti-parallel
Strand 3
C
1472 1477anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
68 71first strand
Strand 2
D
120 123anti-parallel
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There are 10 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
263 264first strand
Strand 2
D
128 132parallel
Strand 3
D
140 145anti-parallel
Strand 4
D
283 287parallel
Strand 5
D
237 243parallel
Strand 6
D
203 208parallel
Strand 7
D
169 174parallel
Strand 8
D
325 329parallel
Strand 9
D
350 351parallel
Strand 10
D
416 417parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
313 316first strand
Strand 2
D
319 322anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
708 709first strand
Strand 2
D
715 716anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1275 1277first strand
Strand 2
D
1334 1337parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1319 1320first strand
Strand 2
D
1323 1324anti-parallel
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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1385 1386first strand
Strand 2
D
1372 1378anti-parallel
Strand 3
D
1346 1355anti-parallel
Strand 4
D
1440 1449parallel
Strand 5
D
1422 1429anti-parallel
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There are 3 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1385 1386first strand
Strand 2
D
1372 1378anti-parallel
Strand 3
D
1472 1477anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il