Analysis of interatomic Contacts of Structural Units in PDB entry:
6PUS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6PUS entry

There are 4 chains in PDB entry 6PUS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLN 56TYR 1503
C
GLN 56TYR 1503
D
GLN 56TYR 1503
B
GLN 56TYR 1503
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are224 helices in PDB entry 6PUS. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
56 67Right-handed alpha
Helix 2
AA2
A
150 161Right-handed alpha
Helix 3
AA3
A
183 202Right-handed alpha
Helix 4
AA4
A
212 229Right-handed alpha
Helix 5
AA5
A
249 253Right-handed 310
Helix 6
AA6
A
298 312Right-handed alpha
Helix 7
AA7
A
333 345Right-handed alpha
Helix 8
AA8
A
357 365Right-handed alpha
Helix 9
AA9
A
370 374Right-handed 310
Helix 10
AB1
A
375 387Right-handed alpha
Helix 11
AB2
A
390 394Right-handed 310
Helix 12
AB3
A
395 412Right-handed alpha
Helix 13
AB4
A
429 445Right-handed alpha
Helix 14
AB5
A
449 462Right-handed alpha
Helix 15
AB6
A
464 471Right-handed alpha
Helix 16
AB7
A
480 483Right-handed 310
Helix 17
AB8
A
484 494Right-handed alpha
Helix 18
AB9
A
496 507Right-handed alpha
Helix 19
AC1
A
509 514Right-handed alpha
Helix 20
AC2
A
515 525Right-handed alpha
Helix 21
AC3
A
530 542Right-handed alpha
Helix 22
AC4
A
557 570Right-handed alpha
Helix 23
AC5
A
620 632Right-handed alpha
Helix 24
AC6
A
634 642Right-handed alpha
Helix 25
AC7
A
647 663Right-handed alpha
Helix 26
AC8
A
670 697Right-handed alpha
Helix 27
AC9
A
697 702Right-handed alpha
Helix 28
AD1
A
703 705Right-handed 310
Helix 29
AD2
A
717 724Right-handed alpha
Helix 30
AD3
A
726 731Right-handed alpha
Helix 31
AD4
A
732 744Right-handed alpha
Helix 32
AD5
A
753 762Right-handed alpha
Helix 33
AD6
A
762 768Right-handed alpha
Helix 34
AD7
A
776 781Right-handed alpha
Helix 35
AD8
A
783 794Right-handed alpha
Helix 36
AD9
A
794 819Right-handed alpha
Helix 37
AE1
A
826 849Right-handed alpha
Helix 38
AE2
A
855 865Right-handed alpha
Helix 39
AE3
A
866 888Right-handed alpha
Helix 40
AE4
A
891 912Right-handed alpha
Helix 41
AE5
A
913 916Right-handed 310
Helix 42
AE6
A
920 956Right-handed alpha
Helix 43
AE7
A
965 980Right-handed alpha
Helix 44
AE8
A
1021 1036Right-handed alpha
Helix 45
AE9
A
1038 1056Right-handed alpha
Helix 46
AF1
A
1058 1067Right-handed alpha
Helix 47
AF2
A
1067 1077Right-handed alpha
Helix 48
AF3
A
1084 1099Right-handed alpha
Helix 49
AF4
A
1114 1141Right-handed alpha
Helix 50
AF5
A
1143 1165Right-handed alpha
Helix 51
AF6
A
1279 1282Right-handed 310
Helix 52
AF7
A
1288 1292Right-handed 310
Helix 53
AF8
A
1397 1404Right-handed alpha
Helix 54
AF9
A
1410 1418Right-handed alpha
Helix 55
AG1
A
1455 1463Right-handed alpha
Helix 56
AG2
A
1485 1496Right-handed alpha
Helix 57
AG3
C
57 67Right-handed alpha
Helix 58
AG4
C
150 161Right-handed alpha
Helix 59
AG5
C
183 202Right-handed alpha
Helix 60
AG6
C
212 229Right-handed alpha
Helix 61
AG7
C
249 253Right-handed 310
Helix 62
AG8
C
298 312Right-handed alpha
Helix 63
AG9
C
333 345Right-handed alpha
Helix 64
AH1
C
357 365Right-handed alpha
Helix 65
AH2
C
370 374Right-handed 310
Helix 66
AH3
C
375 387Right-handed alpha
Helix 67
AH4
C
390 394Right-handed 310
Helix 68
AH5
C
395 412Right-handed alpha
Helix 69
AH6
C
429 445Right-handed alpha
Helix 70
AH7
C
449 462Right-handed alpha
Helix 71
AH8
C
464 471Right-handed alpha
Helix 72
AH9
C
480 483Right-handed 310
Helix 73
AI1
C
484 494Right-handed alpha
Helix 74
AI2
C
496 507Right-handed alpha
Helix 75
AI3
C
509 514Right-handed alpha
Helix 76
AI4
C
515 525Right-handed alpha
Helix 77
AI5
C
530 542Right-handed alpha
Helix 78
AI6
C
557 570Right-handed alpha
Helix 79
AI7
C
620 632Right-handed alpha
Helix 80
AI8
C
634 642Right-handed alpha
Helix 81
AI9
C
647 663Right-handed alpha
Helix 82
AJ1
C
670 697Right-handed alpha
Helix 83
AJ2
C
697 702Right-handed alpha
Helix 84
AJ3
C
703 705Right-handed 310
Helix 85
AJ4
C
717 724Right-handed alpha
Helix 86
AJ5
C
726 731Right-handed alpha
Helix 87
AJ6
C
732 744Right-handed alpha
Helix 88
AJ7
C
753 762Right-handed alpha
Helix 89
AJ8
C
762 768Right-handed alpha
Helix 90
AJ9
C
776 781Right-handed alpha
Helix 91
AK1
C
783 794Right-handed alpha
Helix 92
AK2
C
794 819Right-handed alpha
Helix 93
AK3
C
826 849Right-handed alpha
Helix 94
AK4
C
855 865Right-handed alpha
Helix 95
AK5
C
866 888Right-handed alpha
Helix 96
AK6
C
891 912Right-handed alpha
Helix 97
AK7
C
913 916Right-handed 310
Helix 98
AK8
C
920 956Right-handed alpha
Helix 99
AK9
C
965 980Right-handed alpha
Helix 100
AL1
C
1021 1036Right-handed alpha
Helix 101
AL2
C
1038 1056Right-handed alpha
Helix 102
AL3
C
1058 1067Right-handed alpha
Helix 103
AL4
C
1067 1077Right-handed alpha
Helix 104
AL5
C
1084 1099Right-handed alpha
Helix 105
AL6
C
1114 1141Right-handed alpha
Helix 106
AL7
C
1143 1165Right-handed alpha
Helix 107
AL8
C
1279 1282Right-handed 310
Helix 108
AL9
C
1288 1292Right-handed 310
Helix 109
AM1
C
1397 1404Right-handed alpha
Helix 110
AM2
C
1410 1418Right-handed alpha
Helix 111
AM3
C
1455 1463Right-handed alpha
Helix 112
AM4
C
1485 1496Right-handed alpha
Helix 113
AM5
D
57 67Right-handed alpha
Helix 114
AM6
D
150 161Right-handed alpha
Helix 115
AM7
D
183 202Right-handed alpha
Helix 116
AM8
D
212 229Right-handed alpha
Helix 117
AM9
D
249 253Right-handed 310
Helix 118
AN1
D
298 312Right-handed alpha
Helix 119
AN2
D
333 345Right-handed alpha
Helix 120
AN3
D
357 365Right-handed alpha
Helix 121
AN4
D
370 374Right-handed 310
Helix 122
AN5
D
375 387Right-handed alpha
Helix 123
AN6
D
390 394Right-handed 310
Helix 124
AN7
D
395 412Right-handed alpha
Helix 125
AN8
D
429 445Right-handed alpha
Helix 126
AN9
D
449 462Right-handed alpha
Helix 127
AO1
D
464 471Right-handed alpha
Helix 128
AO2
D
480 483Right-handed 310
Helix 129
AO3
D
484 494Right-handed alpha
Helix 130
AO4
D
496 507Right-handed alpha
Helix 131
AO5
D
509 514Right-handed alpha
Helix 132
AO6
D
515 525Right-handed alpha
Helix 133
AO7
D
530 542Right-handed alpha
Helix 134
AO8
D
557 570Right-handed alpha
Helix 135
AO9
D
620 632Right-handed alpha
Helix 136
AP1
D
634 642Right-handed alpha
Helix 137
AP2
D
647 663Right-handed alpha
Helix 138
AP3
D
670 697Right-handed alpha
Helix 139
AP4
D
697 702Right-handed alpha
Helix 140
AP5
D
703 705Right-handed 310
Helix 141
AP6
D
717 724Right-handed alpha
Helix 142
AP7
D
726 731Right-handed alpha
Helix 143
AP8
D
732 744Right-handed alpha
Helix 144
AP9
D
753 762Right-handed alpha
Helix 145
AQ1
D
762 768Right-handed alpha
Helix 146
AQ2
D
776 781Right-handed alpha
Helix 147
AQ3
D
783 794Right-handed alpha
Helix 148
AQ4
D
794 819Right-handed alpha
Helix 149
AQ5
D
826 849Right-handed alpha
Helix 150
AQ6
D
855 865Right-handed alpha
Helix 151
AQ7
D
866 888Right-handed alpha
Helix 152
AQ8
D
891 912Right-handed alpha
Helix 153
AQ9
D
913 916Right-handed 310
Helix 154
AR1
D
920 956Right-handed alpha
Helix 155
AR2
D
965 980Right-handed alpha
Helix 156
AR3
D
1021 1036Right-handed alpha
Helix 157
AR4
D
1038 1056Right-handed alpha
Helix 158
AR5
D
1058 1067Right-handed alpha
Helix 159
AR6
D
1067 1077Right-handed alpha
Helix 160
AR7
D
1084 1099Right-handed alpha
Helix 161
AR8
D
1114 1141Right-handed alpha
Helix 162
AR9
D
1143 1165Right-handed alpha
Helix 163
AS1
D
1279 1282Right-handed 310
Helix 164
AS2
D
1288 1292Right-handed 310
Helix 165
AS3
D
1397 1404Right-handed alpha
Helix 166
AS4
D
1410 1418Right-handed alpha
Helix 167
AS5
D
1455 1463Right-handed alpha
Helix 168
AS6
D
1485 1496Right-handed alpha
Helix 169
AS7
B
57 67Right-handed alpha
Helix 170
AS8
B
150 161Right-handed alpha
Helix 171
AS9
B
183 202Right-handed alpha
Helix 172
AT1
B
212 229Right-handed alpha
Helix 173
AT2
B
249 253Right-handed 310
Helix 174
AT3
B
298 312Right-handed alpha
Helix 175
AT4
B
333 345Right-handed alpha
Helix 176
AT5
B
357 365Right-handed alpha
Helix 177
AT6
B
370 374Right-handed 310
Helix 178
AT7
B
375 387Right-handed alpha
Helix 179
AT8
B
390 394Right-handed 310
Helix 180
AT9
B
395 412Right-handed alpha
Helix 181
AU1
B
429 445Right-handed alpha
Helix 182
AU2
B
449 462Right-handed alpha
Helix 183
AU3
B
464 471Right-handed alpha
Helix 184
AU4
B
480 483Right-handed 310
Helix 185
AU5
B
484 494Right-handed alpha
Helix 186
AU6
B
496 507Right-handed alpha
Helix 187
AU7
B
509 514Right-handed alpha
Helix 188
AU8
B
515 525Right-handed alpha
Helix 189
AU9
B
530 542Right-handed alpha
Helix 190
AV1
B
557 570Right-handed alpha
Helix 191
AV2
B
620 632Right-handed alpha
Helix 192
AV3
B
634 642Right-handed alpha
Helix 193
AV4
B
647 663Right-handed alpha
Helix 194
AV5
B
670 697Right-handed alpha
Helix 195
AV6
B
697 702Right-handed alpha
Helix 196
AV7
B
703 705Right-handed 310
Helix 197
AV8
B
717 724Right-handed alpha
Helix 198
AV9
B
726 731Right-handed alpha
Helix 199
AW1
B
732 744Right-handed alpha
Helix 200
AW2
B
753 762Right-handed alpha
Helix 201
AW3
B
762 768Right-handed alpha
Helix 202
AW4
B
776 781Right-handed alpha
Helix 203
AW5
B
783 794Right-handed alpha
Helix 204
AW6
B
794 819Right-handed alpha
Helix 205
AW7
B
826 849Right-handed alpha
Helix 206
AW8
B
855 865Right-handed alpha
Helix 207
AW9
B
866 888Right-handed alpha
Helix 208
AX1
B
891 912Right-handed alpha
Helix 209
AX2
B
913 916Right-handed 310
Helix 210
AX3
B
920 956Right-handed alpha
Helix 211
AX4
B
965 980Right-handed alpha
Helix 212
AX5
B
1021 1036Right-handed alpha
Helix 213
AX6
B
1038 1056Right-handed alpha
Helix 214
AX7
B
1058 1067Right-handed alpha
Helix 215
AX8
B
1067 1077Right-handed alpha
Helix 216
AX9
B
1084 1099Right-handed alpha
Helix 217
AY1
B
1114 1141Right-handed alpha
Helix 218
AY2
B
1143 1165Right-handed alpha
Helix 219
AY3
B
1279 1282Right-handed 310
Helix 220
AY4
B
1288 1292Right-handed 310
Helix 221
AY5
B
1397 1404Right-handed alpha
Helix 222
AY6
B
1410 1418Right-handed alpha
Helix 223
AY7
B
1455 1463Right-handed alpha
Helix 224
AY8
B
1485 1496Right-handed alpha
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There are 32 sheets in PDB entry 6PUS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
68 71first strand
Strand 2
A
120 123anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
128 130first strand
Strand 2
A
140 145anti-parallel
Strand 3
A
283 287parallel
Strand 4
A
238 243parallel
Strand 5
A
204 208parallel
Strand 6
A
170 174parallel
Strand 7
A
325 329parallel
Strand 8
A
350 352parallel
Strand 9
A
416 418parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
708 709first strand
Strand 2
A
715 716anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1275 1277first strand
Strand 2
A
1334 1337parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1303 1305first strand
Strand 2
A
1308 1310anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1319 1320first strand
Strand 2
A
1323 1324anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1385 1386first strand
Strand 2
A
1372 1378anti-parallel
Strand 3
A
1343 1355anti-parallel
Strand 4
A
1438 1449parallel
Strand 5
A
1422 1429anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1390 1391first strand
Strand 2
A
1343 1355anti-parallel
Strand 3
A
1372 1378anti-parallel
Strand 4
A
1472 1477anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
68 71first strand
Strand 2
C
120 123anti-parallel
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There are 9 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
128 130first strand
Strand 2
C
140 145anti-parallel
Strand 3
C
283 287parallel
Strand 4
C
238 243parallel
Strand 5
C
204 208parallel
Strand 6
C
170 174parallel
Strand 7
C
325 329parallel
Strand 8
C
350 352parallel
Strand 9
C
416 418parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
708 709first strand
Strand 2
C
715 716anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1275 1277first strand
Strand 2
C
1334 1337parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1303 1305first strand
Strand 2
C
1308 1310anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1319 1320first strand
Strand 2
C
1323 1324anti-parallel
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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1385 1386first strand
Strand 2
C
1372 1378anti-parallel
Strand 3
C
1343 1355anti-parallel
Strand 4
C
1438 1449parallel
Strand 5
C
1422 1429anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
1390 1391first strand
Strand 2
C
1343 1355anti-parallel
Strand 3
C
1372 1378anti-parallel
Strand 4
C
1472 1477anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
68 71first strand
Strand 2
D
120 123anti-parallel
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There are 9 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
128 130first strand
Strand 2
D
140 145anti-parallel
Strand 3
D
283 287parallel
Strand 4
D
238 243parallel
Strand 5
D
204 208parallel
Strand 6
D
170 174parallel
Strand 7
D
325 329parallel
Strand 8
D
350 352parallel
Strand 9
D
416 418parallel
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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
708 709first strand
Strand 2
D
715 716anti-parallel
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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1275 1277first strand
Strand 2
D
1334 1337parallel
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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1303 1305first strand
Strand 2
D
1308 1310anti-parallel
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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1319 1320first strand
Strand 2
D
1323 1324anti-parallel
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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1385 1386first strand
Strand 2
D
1372 1378anti-parallel
Strand 3
D
1343 1355anti-parallel
Strand 4
D
1438 1449parallel
Strand 5
D
1422 1429anti-parallel
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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
1390 1391first strand
Strand 2
D
1343 1355anti-parallel
Strand 3
D
1372 1378anti-parallel
Strand 4
D
1472 1477anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
68 71first strand
Strand 2
B
120 123anti-parallel
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There are 9 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
128 130first strand
Strand 2
B
140 145anti-parallel
Strand 3
B
283 287parallel
Strand 4
B
238 243parallel
Strand 5
B
204 208parallel
Strand 6
B
170 174parallel
Strand 7
B
325 329parallel
Strand 8
B
350 352parallel
Strand 9
B
416 418parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
708 709first strand
Strand 2
B
715 716anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1275 1277first strand
Strand 2
B
1334 1337parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1303 1305first strand
Strand 2
B
1308 1310anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1319 1320first strand
Strand 2
B
1323 1324anti-parallel
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There are 5 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1385 1386first strand
Strand 2
B
1372 1378anti-parallel
Strand 3
B
1343 1355anti-parallel
Strand 4
B
1438 1449parallel
Strand 5
B
1422 1429anti-parallel
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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
1390 1391first strand
Strand 2
B
1343 1355anti-parallel
Strand 3
B
1372 1378anti-parallel
Strand 4
B
1472 1477anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il