Analysis of interatomic Contacts of Structural Units in PDB entry:
6QZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6QZ1 entry

There is 1 chain in PDB entry 6QZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 40PRO 603
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6QZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 53Right-handed alpha
Helix 2
AA2
A
152 156Right-handed 310
Helix 3
AA3
A
177 184Right-handed 310
Helix 4
AA4
A
185 194Right-handed alpha
Helix 5
AA5
A
194 213Right-handed alpha
Helix 6
AA6
A
225 238Right-handed alpha
Helix 7
AA7
A
253 255Right-handed 310
Helix 8
AA8
A
256 269Right-handed alpha
Helix 9
AA9
A
270 272Right-handed 310
Helix 10
AB1
A
282 287Right-handed 310
Helix 11
AB2
A
288 304Right-handed alpha
Helix 12
AB3
A
305 308Right-handed 310
Helix 13
AB4
A
316 324Right-handed alpha
Helix 14
AB5
A
350 363Right-handed alpha
Helix 15
AB6
A
379 383Right-handed 310
Helix 16
AB7
A
414 424Right-handed alpha
Helix 17
AB8
A
432 434Right-handed 310
Helix 18
AB9
A
435 442Right-handed alpha
Helix 19
AC1
A
447 453Right-handed 310
Helix 20
AC2
A
462 468Right-handed alpha
Helix 21
AC3
A
474 480Right-handed alpha
Helix 22
AC4
A
496 511Right-handed alpha
Helix 23
AC5
A
513 516Right-handed 310
Helix 24
AC6
A
540 551Right-handed alpha
Helix 25
AC7
A
563 568Right-handed 310
Helix 26
AC8
A
593 595Right-handed 310
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There are 4 sheets in PDB entry 6QZ1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 76first strand
Strand 2
A
91 102anti-parallel
Strand 3
A
108 118anti-parallel
Strand 4
A
158 162anti-parallel
Strand 5
A
124 128parallel
Strand 6
A
218 224parallel
Strand 7
A
244 248parallel
Strand 8
A
483 489parallel
Strand 9
A
518 523parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
385 386first strand
Strand 2
A
389 390anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
557 560first strand
Strand 2
A
573 576anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 585first strand
Strand 2
A
597 600anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il